RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 FAM160B2Q86V87 743 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 STK11IPQ8N1F8 1099 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 ANKRD35Q8N283 1001 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 REPS2Q8NFH8 660 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 MKL2Q9ULH7 1088 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 ISY1Q9ULR0 285 aaKnown RBP10.93□□□□□ -0.66
CIITA-208ENST00000572665 CYP8B1Q9UNU6 501 aa10.93□□□□□ -0.66
CIITA-208ENST00000572665 PLIN4Q96Q06 1357 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 A0A0A0MRY4 1105 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 GNB5O14775 395 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 PF4P02776 101 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 CHGBP05060 677 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 CYP11A1P05108 521 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 GSTP1P09211 210 aaKnown RBP10.92□□□□□ -0.66
CIITA-208ENST00000572665 CLTBP09497 229 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 BMP3P12645 472 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 MX1P20591 662 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
CIITA-208ENST00000572665 CAMK2GQ13555 558 aaPredicted RBP10.92□□□□□ -0.66
CIITA-208ENST00000572665 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 SLFN13Q68D06 897 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 LLGL2Q6P1M3 1020 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 MAMDC4Q6UXC1 1216 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 TICAM2Q86XR7 235 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 ZSCAN1Q8NBB4 408 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 PCSK9Q8NBP7 692 aaKnown RBP10.92□□□□□ -0.66
CIITA-208ENST00000572665 GRIN3AQ8TCU5 1115 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 FERMT2Q96AC1 680 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 ABHD16BQ9H3Z7 469 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 CBX8Q9HC52 389 aa10.92□□□□□ -0.66
CIITA-208ENST00000572665 TSPY2A6NKD2 308 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 DCDC2CA8MYV0 355 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 SMIM22K7EJ46 135 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 M0R2C6 588 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 ADAM11O75078 769 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 DUSP11O75319 330 aaKnown RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 ZNF865P0CJ78 1059 aaPredicted RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 RAG1P15918 1043 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 GARTP22102 1010 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 SLC1A4P43007 532 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 PPARAQ07869 468 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 POU4F3Q15319 338 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 TKFCQ3LXA3 575 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 FOXD4L6Q3SYB3 417 aaPredicted RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 CCDC174Q6PII3 467 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 FOXD4L3Q6VB84 417 aaPredicted RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 FMR1NBQ8N0W7 255 aaPredicted RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 GLT1D1Q96MS3 346 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 NUP88Q99567 741 aaPredicted RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 SPON2Q9BUD6 331 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 PLVAPQ9BX97 442 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 CAPN10Q9HC96 672 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 PDLIM7Q9NR12 457 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 MTMR10Q9NXD2 777 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 ZHX1Q9UKY1 873 aaPredicted RBP10.91□□□□□ -0.66
CIITA-208ENST00000572665 PCDHB5Q9Y5E4 795 aa10.91□□□□□ -0.66
CIITA-208ENST00000572665 DNAJC25-GNG10A0A024R161 153 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 A0A1W2PQ45 241 aaPredicted RBP10.9□□□□□ -0.66
CIITA-208ENST00000572665 A0A1W2PQY0 241 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 PIK3R2O00459 728 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 PRDM1O75626 825 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 PGK1P00558 417 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 CD68P34810 354 aaPredicted RBP10.9□□□□□ -0.66
CIITA-208ENST00000572665 NLRP12P59046 1061 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 RAC1P63000 192 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 TFAP4Q01664 338 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 FAM160A1Q05DH4 1040 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 PAK2Q13177 524 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 ZMYM1Q5SVZ6 1142 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 TSHZ3Q63HK5 1081 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 FBXL19Q6PCT2 694 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 Q7L0L9 218 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 FBXO11Q86XK2 927 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 TRIM42Q8IWZ5 723 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 BADQ92934 168 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 EVI5LQ96CN4 794 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 ACAD9Q9H845 621 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
CIITA-208ENST00000572665 EPB41L4AQ9HCS5 686 aaPredicted RBP10.9□□□□□ -0.66
CIITA-208ENST00000572665 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 INPP5FQ9Y2H2 1132 aa10.9□□□□□ -0.66
CIITA-208ENST00000572665 ELP1O95163 1332 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 ASB14A6NK59 587 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 DLL1O00548 723 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 TLR3O15455 904 aaKnown RBP10.89□□□□□ -0.67
CIITA-208ENST00000572665 DDX3YO15523 660 aaKnown RBP10.89□□□□□ -0.67
CIITA-208ENST00000572665 PLA2G6O60733 806 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 PQBP1O60828 265 aaKnown RBP10.89□□□□□ -0.67
CIITA-208ENST00000572665 ECEL1O95672 775 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 MAOBP27338 520 aa10.89□□□□□ -0.67
CIITA-208ENST00000572665 CST5P28325 142 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms