RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 DRP2Q13474 957 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 TARBP2Q15633 366 aaKnown RBP20.47■□□□□ 0.87
CHD3-214ENST00000572579 CTC1Q2NKJ3 1217 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 TIGD5Q53EQ6 642 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 EFCAB12Q6NXP0 572 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 ETNPPLQ8TBG4 499 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 C11orf84Q9BUA3 381 aaPredicted RBP20.47■□□□□ 0.87
CHD3-214ENST00000572579 SAMM50Q9Y512 469 aa20.47■□□□□ 0.87
CHD3-214ENST00000572579 GRXCR2A6NFK2 248 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 CSPG5O95196 566 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 OATP04181 439 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 IBSPP21815 317 aaPredicted RBP20.46■□□□□ 0.87
CHD3-214ENST00000572579 IRS1P35568 1242 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 PRKCEQ02156 737 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 LRCH2Q5VUJ6 765 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 FAM178BQ8IXR5 827 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 KLHL23Q8NBE8 558 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 OXER1Q8TDS5 423 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 PABPC5Q96DU9 382 aaKnown RBP20.46■□□□□ 0.87
CHD3-214ENST00000572579 SH2D3AQ9BRG2 576 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 PLVAPQ9BX97 442 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 RNF19AQ9NV58 838 aa20.46■□□□□ 0.87
CHD3-214ENST00000572579 CPLX1O14810 134 aa20.45■□□□□ 0.86
CHD3-214ENST00000572579 SLC37A4O43826 429 aa20.45■□□□□ 0.86
CHD3-214ENST00000572579 GAS7O60861 476 aa20.45■□□□□ 0.86
CHD3-214ENST00000572579 NLRP11P59045 1033 aaKnown RBP20.45■□□□□ 0.86
CHD3-214ENST00000572579 EARS2Q5JPH6 523 aaKnown RBP20.45■□□□□ 0.86
CHD3-214ENST00000572579 PTCRAQ6ISU1 281 aaPredicted RBP20.45■□□□□ 0.86
CHD3-214ENST00000572579 PHF20Q9BVI0 1012 aa20.45■□□□□ 0.86
CHD3-214ENST00000572579 RWDD3Q9Y3V2 267 aa20.45■□□□□ 0.86
CHD3-214ENST00000572579 PCDHGC5Q9Y5F6 944 aa20.45■□□□□ 0.86
CHD3-214ENST00000572579 EML1O00423 815 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 GPR182O15218 404 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 MAGEB2O15479 319 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 LINC01565O15544 149 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 PFKFB2O60825 505 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 MMP1P03956 469 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 STAG3L1P0CL83 205 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 COL9A1P20849 921 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 INF2Q27J81 1249 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 SLC24A5Q71RS6 500 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 P2RX5Q93086 422 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 FAM167AQ96KS9 214 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 TEKT3Q9BXF9 490 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 LMAN2LQ9H0V9 348 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 C11orf16Q9NQ32 467 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 NRBP2Q9NSY0 501 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 PCDHB7Q9Y5E2 793 aa20.44■□□□□ 0.86
CHD3-214ENST00000572579 CSDE1O75534 798 aaKnown RBP20.43■□□□□ 0.86
CHD3-214ENST00000572579 FGFR1P11362 822 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 FDPSP14324 419 aaKnown RBP20.43■□□□□ 0.86
CHD3-214ENST00000572579 LRRC55Q6ZSA7 311 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 ADGRD2Q7Z7M1 963 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 NIFKQ9BYG3 293 aaKnown RBP20.43■□□□□ 0.86
CHD3-214ENST00000572579 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 CLDND1Q9NY35 253 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 CEP131Q9UPN4 1083 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 C5orf42Q9H799 3197 aa20.43■□□□□ 0.86
CHD3-214ENST00000572579 DENND3A2RUS2 1198 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 TBKBP1A7MCY6 615 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 LARGE1O95461 756 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 FGFR4P22455 802 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 SFNP31947 248 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 GPC3P51654 580 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 JAK3P52333 1124 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 AK2P54819 239 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 GALNT17Q6IS24 598 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 MOXD1Q6UVY6 613 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 MIER3Q7Z3K6 550 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 CWH43Q9H720 699 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 C1orf112Q9NSG2 853 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 TYW1Q9NV66 732 aaKnown RBP20.42■□□□□ 0.86
CHD3-214ENST00000572579 LRFN2Q9ULH4 789 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 AKT3Q9Y243 479 aa20.42■□□□□ 0.86
CHD3-214ENST00000572579 IGKV6-21A0A0C4DH24 114 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 FAM205CA6NFA0 338 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 EIF4BP23588 611 aaKnown RBP20.41■□□□□ 0.86
CHD3-214ENST00000572579 ADAM15Q13444 863 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 NONOQ15233 471 aaKnown RBP eCLIP20.41■□□□□ 0.86
CHD3-214ENST00000572579 EP400NLQ6ZTU2 488 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 NECAB1Q8N987 351 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 ZNF579Q8NAF0 562 aaKnown RBP20.41■□□□□ 0.86
CHD3-214ENST00000572579 POF1BQ8WVV4 589 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 HAS1Q92839 578 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 C22orf23Q9BZE7 217 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 SLKQ9H2G2 1235 aaPredicted RBP20.41■□□□□ 0.86
CHD3-214ENST00000572579 IGFLR1Q9H665 355 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 KCNMB3Q9NPA1 279 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 WRAP73Q9P2S5 460 aaPredicted RBP20.41■□□□□ 0.86
CHD3-214ENST00000572579 DDX25Q9UHL0 483 aaKnown RBP20.41■□□□□ 0.86
CHD3-214ENST00000572579 TCEAL9Q9UHQ7 104 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 VAV3Q9UKW4 847 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 EVPLQ92817 2033 aa20.41■□□□□ 0.86
CHD3-214ENST00000572579 TBX10O75333 385 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 SEC24BO95487 1268 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 DARSP14868 501 aaKnown RBP20.4■□□□□ 0.86
CHD3-214ENST00000572579 ME3Q16798 604 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 LETM2Q2VYF4 491 aa20.4■□□□□ 0.86
CHD3-214ENST00000572579 NAALADL2Q58DX5 795 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms