RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 ALG1Q9BT22 464 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 RANBP17Q9H2T7 1088 aaKnown RBP7.32□□□□□ -1.24
PRPF8-204ENST00000572445 VAT1LQ9HCJ6 419 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 VTA1Q9NP79 307 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 ZDHHC3Q9NYG2 299 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 SIRPGQ9P1W8 387 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 FNDC3AQ9Y2H6 1198 aaKnown RBP7.32□□□□□ -1.24
PRPF8-204ENST00000572445 NLRC5Q86WI3 1866 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 MICAL3Q7RTP6 2002 aa7.32□□□□□ -1.24
PRPF8-204ENST00000572445 SIP14410 1827 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 CCDC171Q6TFL3 1326 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 RAD50Q92878 1312 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 FAM86C2PA6NEL3 165 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 ARIH2O95376 493 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 TXNP10599 105 aaKnown RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 PDHBP11177 359 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 IBSPP21815 317 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 RPS6P62753 249 aaKnown RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 PURAQ00577 322 aaKnown RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 KCNC4Q03721 635 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 CDC37Q16543 378 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 LY6KQ17RY6 165 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 RNF187Q5TA31 235 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 PEAR1Q5VY43 1037 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 RPUSD2Q8IZ73 545 aaKnown RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 AFG1LQ8WV93 481 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 KAT6AQ92794 2004 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 MTG1Q9BT17 334 aaPredicted RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 BRINP2Q9C0B6 783 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 PCDH12Q9NPG4 1184 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 UBP1Q9NZI7 540 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 ADD3Q9UEY8 706 aaKnown RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 TLR6Q9Y2C9 796 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 SPTBN5Q9NRC6 3674 aaKnown RBP7.31□□□□□ -1.24
PRPF8-204ENST00000572445 ATG2AQ2TAZ0 1938 aa7.31□□□□□ -1.24
PRPF8-204ENST00000572445 A0A1W2PP55 124 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 LCHNA4D1U4 455 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 B4E1Z4 1266 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 ORC4O43929 436 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 CABYRO75952 493 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 FGAP02671 866 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 HSPD1P10809 573 aaKnown RBP7.3□□□□□ -1.24
PRPF8-204ENST00000572445 MYCLP12524 364 aaPredicted RBP7.3□□□□□ -1.24
PRPF8-204ENST00000572445 GGCXP38435 758 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 KCNJ6P48051 423 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 CPT1AP50416 773 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 PDE1AP54750 535 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 ANAPC15P60006 121 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 DEFB103AP81534 67 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 MRPS5P82675 430 aaKnown RBP7.3□□□□□ -1.24
PRPF8-204ENST00000572445 SP4Q02446 784 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 ZNF543Q08ER8 600 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 HIF1AQ16665 826 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 DUSP28Q4G0W2 176 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 TMEM67Q5HYA8 995 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 RASIP1Q5U651 963 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 IQSEC1Q6DN90 963 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 CWC27Q6UX04 472 aaKnown RBP7.3□□□□□ -1.24
PRPF8-204ENST00000572445 MFSD6Q6ZSS7 791 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 HOMER1Q86YM7 354 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 CLEC4DQ8WXI8 215 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 TBC1D5Q92609 795 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 ANAPC16Q96DE5 110 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 ASB2Q96Q27 587 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.3□□□□□ -1.24
PRPF8-204ENST00000572445 DIAPH3Q9NSV4 1193 aa7.3□□□□□ -1.24
PRPF8-204ENST00000572445 SALL3Q9BXA9 1300 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 LOXHD1Q8IVV2 1947 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 XYLBO75191 536 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 PARNO95453 639 aaKnown RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 CFBP00751 764 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 ACTN1P12814 892 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 HOXA13P31271 388 aaPredicted RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 ZNF200P98182 395 aaPredicted RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 TYRO3Q06418 890 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 PTGISQ16647 500 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 TCTN1Q2MV58 587 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 QRICH1Q2TAL8 776 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 PLEKHG4Q58EX7 1191 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 BRDTQ58F21 947 aaPredicted RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 AKNAD1Q5T1N1 836 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 KIAA0319Q5VV43 1072 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 CCDC81Q6ZN84 652 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 LRRC69Q6ZNQ3 347 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 RELL1Q8IUW5 271 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 CELF2-AS1Q8N7Q2 184 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 PHC3Q8NDX5 983 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 SCFD2Q8WU76 684 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 TAAR1Q96RJ0 339 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 INSM2Q96T92 566 aaPredicted RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 KAT14Q9H8E8 782 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 ABCB6Q9NP58 842 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 HELLSQ9NRZ9 838 aa7.29□□□□□ -1.24
PRPF8-204ENST00000572445 ABI2Q9NYB9 513 aaPredicted RBP7.29□□□□□ -1.24
PRPF8-204ENST00000572445 COL20A1Q9P218 1284 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms