RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 COL1A2P08123 1366 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 SPTBN2O15020 2390 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 ASGR2P07307 311 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 AOC1P19801 751 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 GNAQP50148 359 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 CRYBB1P53674 252 aaPredicted RBP12.94□□□□□ -0.34
CHMP6-202ENST00000571457 FAM160B1Q5W0V3 765 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 KIAA0319LQ8IZA0 1049 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 TMEM40Q8WWA1 233 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 ACSF2Q96CM8 615 aaPredicted RBP12.94□□□□□ -0.34
CHMP6-202ENST00000571457 SMOC2Q9H3U7 446 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 SENP2Q9HC62 589 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 CYP26B1Q9NR63 512 aa12.94□□□□□ -0.34
CHMP6-202ENST00000571457 DNAH14Q0VDD8 3507 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 C2orf71A6NGG8 1288 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 BACH1O14867 736 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 CLASP2O75122 1294 aaKnown RBP12.93□□□□□ -0.34
CHMP6-202ENST00000571457 DDAH1O94760 285 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 ANGPT1Q15389 498 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 ZNF484Q5JVG2 852 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 RARS2Q5T160 578 aaKnown RBP12.93□□□□□ -0.34
CHMP6-202ENST00000571457 CCDC105Q8IYK2 499 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 KCNG4Q8TDN1 519 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 CASD1Q96PB1 797 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 CDH22Q9UJ99 828 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
CHMP6-202ENST00000571457 CARNS1A5YM72 827 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 EOMESO95936 686 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 LMNAP02545 664 aaKnown RBP12.92□□□□□ -0.34
CHMP6-202ENST00000571457 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
CHMP6-202ENST00000571457 CA8P35219 290 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 ALDH7A1P49419 539 aaKnown RBP12.92□□□□□ -0.34
CHMP6-202ENST00000571457 DSC3Q14574 896 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 KIZQ2M2Z5 673 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 DIEXFQ68CQ4 756 aaKnown RBP12.92□□□□□ -0.34
CHMP6-202ENST00000571457 LRRC55Q6ZSA7 311 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 DGLUCYQ7Z3D6 616 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 FAM228AQ86W67 206 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 TEX2Q8IWB9 1127 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 FBXL21Q9UKT6 434 aa12.92□□□□□ -0.34
CHMP6-202ENST00000571457 EVPLQ92817 2033 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 IGKV6D-21A0A0A0MT36 114 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 E7EWF7 191 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 ATG7O95352 703 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 CXCL14O95715 111 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 CYP21A2P08686 494 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 PBX3P40426 434 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 TDGQ13569 410 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 GIT2Q14161 759 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 UBE2SQ16763 222 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 CWF19L1Q69YN2 538 aaKnown RBP12.91□□□□□ -0.34
CHMP6-202ENST00000571457 B4GALNT3Q6L9W6 998 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 OTOP3Q7RTS5 596 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 CHD1LQ86WJ1 897 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 SMC5Q8IY18 1101 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 IGDCC4Q8TDY8 1250 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 RSPH1Q8WYR4 309 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 TMEM169Q96HH4 297 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 OSMRQ99650 979 aa12.91□□□□□ -0.34
CHMP6-202ENST00000571457 MRPL9Q9BYD2 267 aaKnown RBP12.91□□□□□ -0.34
CHMP6-202ENST00000571457 CACNA1GO43497 2377 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 FOSP01100 380 aaPredicted RBP12.9□□□□□ -0.34
CHMP6-202ENST00000571457 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
CHMP6-202ENST00000571457 AAMPQ13685 434 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 CEP55Q53EZ4 464 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 CABP7Q86V35 215 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
CHMP6-202ENST00000571457 METTL13Q8N6R0 699 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 C12orf76Q8N812 135 aaPredicted RBP12.9□□□□□ -0.34
CHMP6-202ENST00000571457 MTA3Q9BTC8 594 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
CHMP6-202ENST00000571457 AGO4Q9HCK5 861 aaKnown RBP12.9□□□□□ -0.34
CHMP6-202ENST00000571457 ZNF302Q9NR11 478 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
CHMP6-202ENST00000571457 KMT2BQ9UMN6 2715 aaPredicted RBP12.9□□□□□ -0.35
CHMP6-202ENST00000571457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
CHMP6-202ENST00000571457 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 PI15O43692 258 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 GPR32O75388 356 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 C22orf31O95567 290 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CALM1P0DP23 149 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CALM2P0DP24 149 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 CALM3P0DP25 149 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 ARP10275 920 aa12.89□□□□□ -0.35
CHMP6-202ENST00000571457 NPR3P17342 541 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms