RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 IER5Q5VY09 327 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ARRDC4Q8NCT1 418 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 TSEN34Q9BSV6 310 aaKnown RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 MTG1Q9BT17 334 aaPredicted RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 DHX33Q9H6R0 707 aaKnown RBP13.21□□□□□ -0.29
CDRT1-206ENST00000571263 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 TELO2Q9Y4R8 837 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.29
CDRT1-206ENST00000571263 ZSWIM8A7E2V4 1837 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 PHLPP2Q6ZVD8 1323 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 NRCAMQ92823 1304 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 PSMA7O14818 248 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 ADCY6O43306 1168 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 USO1O60763 962 aaKnown RBP13.2□□□□□ -0.3
CDRT1-206ENST00000571263 HIP1RO75146 1068 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 PLS3P13797 630 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 CASP1P29466 404 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
CDRT1-206ENST00000571263 ZNF165P49910 485 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 NPEPPSP55786 919 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 TPM4P67936 248 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 COASYQ13057 564 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
CDRT1-206ENST00000571263 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 NTPCRQ9BSD7 190 aaKnown RBP13.2□□□□□ -0.3
CDRT1-206ENST00000571263 ZHX3Q9H4I2 956 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
CDRT1-206ENST00000571263 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 IGKV6-21A0A0C4DH24 114 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 BECN2A8MW95 431 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 HAS3O00219 553 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 IKBKBO14920 756 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 ADAMTS4O75173 837 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
CDRT1-206ENST00000571263 MYL3P08590 195 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 HSPA8P11142 646 aaKnown RBP13.19□□□□□ -0.3
CDRT1-206ENST00000571263 TMOD1P28289 359 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 TRIM32Q13049 653 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-206ENST00000571263 MFSD10Q14728 455 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 EMC2Q15006 297 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 DPCR1Q3MIW9 517 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 FAM102BQ5T8I3 360 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 FBXO46Q6PJ61 603 aaPredicted RBP13.19□□□□□ -0.3
CDRT1-206ENST00000571263 FAM178BQ8IXR5 827 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 KCNN1Q92952 543 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 HVCN1Q96D96 273 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 ST6GALNAC4Q9H4F1 302 aa13.19□□□□□ -0.3
CDRT1-206ENST00000571263 MYH9P35579 1960 aaKnown RBP13.19□□□□□ -0.3
CDRT1-206ENST00000571263 UBE4BO95155 1302 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 NPHP3-ACAD11A0A0J9YXS1 232 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 GOLGA6L19H0YKK7 550 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 EIF3DO15371 548 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 INSRRP14616 1297 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 MARK3P27448 753 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 PSEN2P49810 448 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 PURAQ00577 322 aaKnown RBP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 RAD51AP2Q09MP3 1159 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 STK4Q13043 487 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 DMP1Q13316 513 aaPredicted RBP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 TRIM50Q86XT4 487 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 MYOCDQ8IZQ8 938 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 DNAJC25Q9H1X3 360 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 MRPL44Q9H9J2 332 aaKnown RBP13.18□□□□□ -0.3
CDRT1-206ENST00000571263 RWDD2AQ9UIY3 292 aa13.18□□□□□ -0.3
CDRT1-206ENST00000571263 PPP1R3GB7ZBB8 358 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
CDRT1-206ENST00000571263 ZNF286BP0CG31 522 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 BMP6P22004 513 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 ARL2P36404 184 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 PRCPP42785 496 aa13.17□□□□□ -0.3
CDRT1-206ENST00000571263 SNRPFP62306 86 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms