RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CLCN3P51790 818 aa19.89■□□□□ 0.77
CIITA-206ENST00000571190 CCDC12Q8WUD4 166 aaPredicted RBP19.89■□□□□ 0.77
CIITA-206ENST00000571190 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
CIITA-206ENST00000571190 RALGAPA2Q2PPJ7 1873 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 FGFR1P11362 822 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 IFNAR1P17181 557 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 GNA11P29992 359 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 PDIA3P30101 505 aaKnown RBP19.88■□□□□ 0.77
CIITA-206ENST00000571190 NDUFV1P49821 464 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 EVCP57679 992 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 RBM23Q86U06 439 aaKnown RBP19.88■□□□□ 0.77
CIITA-206ENST00000571190 METTL13Q8N6R0 699 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 RNF26Q9BY78 433 aaPredicted RBP19.88■□□□□ 0.77
CIITA-206ENST00000571190 ADAMTS10Q9H324 1103 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 CWH43Q9H720 699 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 NCOA5Q9HCD5 579 aaKnown RBP19.88■□□□□ 0.77
CIITA-206ENST00000571190 RNF19AQ9NV58 838 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 TMEM161AQ9NX61 479 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 VPS54Q9P1Q0 977 aa19.88■□□□□ 0.77
CIITA-206ENST00000571190 MSH4O15457 936 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 RBM10P98175 930 aaKnown RBP19.87■□□□□ 0.77
CIITA-206ENST00000571190 ODR4Q5SWX8 454 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 LRRC71Q8N4P6 559 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 COLGALT1Q8NBJ5 622 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 SMRP1Q8NCR6 262 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 VN1R2Q8NFZ6 395 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 SLC26A6Q9BXS9 759 aa19.87■□□□□ 0.77
CIITA-206ENST00000571190 ELAC1Q9H777 363 aaKnown RBP19.87■□□□□ 0.77
CIITA-206ENST00000571190 FGF18O76093 207 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 NLRP11P59045 1033 aaKnown RBP19.86■□□□□ 0.77
CIITA-206ENST00000571190 ERVFC1P60507 584 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 CCT2P78371 535 aaKnown RBP19.86■□□□□ 0.77
CIITA-206ENST00000571190 UBE3AQ05086 875 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 COASYQ13057 564 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 UGCGQ16739 394 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 EFCAB12Q6NXP0 572 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 LRRC55Q6ZSA7 311 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 RNF135Q8IUD6 432 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 GJA10Q969M2 543 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 PPP2R3CQ969Q6 453 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 CASD1Q96PB1 797 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 ATP6V0A4Q9HBG4 840 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 DISC1Q9NRI5 854 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 MUTYHQ9UIF7 546 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 BARX2Q9UMQ3 279 aaPredicted RBP19.86■□□□□ 0.77
CIITA-206ENST00000571190 PCDHB12Q9Y5F1 795 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 MYO7AQ13402 2215 aa19.86■□□□□ 0.77
CIITA-206ENST00000571190 WDR64B1ANS9 1081 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 FSCN2O14926 492 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 PER2O15055 1255 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 MAGEB2O15479 319 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 OATP04181 439 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 AKAP17AQ02040 695 aaKnown RBP19.85■□□□□ 0.77
CIITA-206ENST00000571190 HERC4Q5GLZ8 1057 aaPredicted RBP19.85■□□□□ 0.77
CIITA-206ENST00000571190 SPOUT1Q5T280 376 aaKnown RBP19.85■□□□□ 0.77
CIITA-206ENST00000571190 BICD2Q8TD16 824 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 SLC5A5Q92911 643 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 ZNF668Q96K58 619 aaPredicted RBP19.85■□□□□ 0.77
CIITA-206ENST00000571190 FAM167AQ96KS9 214 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 POP1Q99575 1024 aaKnown RBP19.85■□□□□ 0.77
CIITA-206ENST00000571190 RIT2Q99578 217 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 UPF3BQ9BZI7 483 aaKnown RBP19.85■□□□□ 0.77
CIITA-206ENST00000571190 UNC45AQ9H3U1 944 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 TLE6Q9H808 572 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 CEP131Q9UPN4 1083 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 SAMM50Q9Y512 469 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 NLRC5Q86WI3 1866 aa19.85■□□□□ 0.77
CIITA-206ENST00000571190 EIF4BP23588 611 aaKnown RBP19.84■□□□□ 0.77
CIITA-206ENST00000571190 USP11P51784 963 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 PRKCEQ02156 737 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 TOB2Q14106 344 aaPredicted RBP19.84■□□□□ 0.77
CIITA-206ENST00000571190 CCDC148Q8NFR7 591 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 MICAL1Q8TDZ2 1067 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 TLR9Q9NR96 1032 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 AAASQ9NRG9 546 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 RNF216Q9NWF9 866 aaPredicted RBP19.84■□□□□ 0.77
CIITA-206ENST00000571190 AKT3Q9Y243 479 aa19.84■□□□□ 0.77
CIITA-206ENST00000571190 PSMD10O75832 226 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 STBD1O95210 358 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 GPC3P51654 580 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 KCNC3Q14003 757 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 TARBP2Q15633 366 aaKnown RBP19.83■□□□□ 0.77
CIITA-206ENST00000571190 DUSP6Q16828 381 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 CSPP1Q1MSJ5 1256 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 B3GNT9Q6UX72 402 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 HFE2Q6ZVN8 426 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 THNSL1Q8IYQ7 743 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 TBCKQ8TEA7 893 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 CEP89Q96ST8 783 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 MAP7D2Q96T17 732 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 TMEM117Q9H0C3 514 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 SH3GLB2Q9NR46 395 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 NRBP2Q9NSY0 501 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 TCEAL9Q9UHQ7 104 aa19.83■□□□□ 0.77
CIITA-206ENST00000571190 USP15Q9Y4E8 981 aaPredicted RBP19.83■□□□□ 0.77
CIITA-206ENST00000571190 ATG2AQ2TAZ0 1938 aa19.82■□□□□ 0.76
CIITA-206ENST00000571190 LOC730098B7Z3J9 87 aa19.82■□□□□ 0.76
CIITA-206ENST00000571190 M0R2N6 131 aa19.82■□□□□ 0.76
CIITA-206ENST00000571190 CHMP2AO43633 222 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms