RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 LRRTM3Q86VH5 581 aa5.79□□□□□ -1.48
NUP88-202ENST00000570937 KBTBD2Q8IY47 623 aa5.79□□□□□ -1.48
NUP88-202ENST00000570937 FOXRED1Q96CU9 486 aaPredicted RBP5.79□□□□□ -1.48
NUP88-202ENST00000570937 ACSS2Q9NR19 701 aa5.79□□□□□ -1.48
NUP88-202ENST00000570937 FBXO10Q9UK96 956 aa5.79□□□□□ -1.48
NUP88-202ENST00000570937 CD109Q6YHK3 1445 aa5.79□□□□□ -1.48
NUP88-202ENST00000570937 PHLDB1Q86UU1 1377 aa5.79□□□□□ -1.48
NUP88-202ENST00000570937 KIF13AQ9H1H9 1805 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 NCANO14594 1321 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 CELA3BP08861 270 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 CSF2RBP32927 897 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 KIF11P52732 1056 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 TOP3AQ13472 1001 aaPredicted RBP5.78□□□□□ -1.48
NUP88-202ENST00000570937 C21orf62-AS1Q17RA5 79 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 TBC1D10BQ4KMP7 808 aaPredicted RBP5.78□□□□□ -1.48
NUP88-202ENST00000570937 KANK2Q63ZY3 851 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 CREB3L3Q68CJ9 461 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 RTN4RL1Q86UN2 441 aaPredicted RBP5.78□□□□□ -1.48
NUP88-202ENST00000570937 HIPK4Q8NE63 616 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 RBM15Q96T37 977 aaKnown RBP eCLIP5.78□□□□□ -1.48
NUP88-202ENST00000570937 MTFR1LQ9H019 292 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 OR10A5Q9H207 317 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 UCKL1Q9NWZ5 548 aa5.78□□□□□ -1.48
NUP88-202ENST00000570937 LOC105371045A0A1W2PR82 267 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 PRAMEF22A3QJZ6 481 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 H7C1D1 291 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 KRT37O76014 449 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 CYP17A1P05093 508 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 ITGB3P05106 788 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 ETV4P43268 484 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 EPHB4P54760 987 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 ALDH6A1Q02252 535 aaKnown RBP5.77□□□□□ -1.49
NUP88-202ENST00000570937 SKOR2Q2VWA4 1001 aaPredicted RBP5.77□□□□□ -1.49
NUP88-202ENST00000570937 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 LRSAM1Q6UWE0 723 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 RALYLQ86SE5 291 aaKnown RBP5.77□□□□□ -1.49
NUP88-202ENST00000570937 DHX37Q8IY37 1157 aaKnown RBP5.77□□□□□ -1.49
NUP88-202ENST00000570937 CALML6Q8TD86 181 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 E2F7Q96AV8 911 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 MFSD3Q96ES6 412 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 C16orf92Q96LL3 132 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 FOXB1Q99853 325 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 BDH2Q9BUT1 245 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
NUP88-202ENST00000570937 ZDHHC5Q9C0B5 715 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 ZDHHC9Q9Y397 364 aa5.77□□□□□ -1.49
NUP88-202ENST00000570937 CASKIN1Q8WXD9 1431 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 LAMTOR5O43504 91 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 F2P00734 622 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 PPP2CBP62714 309 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 PPP2CAP67775 309 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 DSG1Q02413 1049 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 USP10Q14694 798 aaKnown RBP5.76□□□□□ -1.49
NUP88-202ENST00000570937 EIF4HQ15056 248 aaKnown RBP5.76□□□□□ -1.49
NUP88-202ENST00000570937 ZNF174Q15697 407 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 WDR72Q3MJ13 1102 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 TMEM200BQ69YZ2 307 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 GIMAP6Q6P9H5 292 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 PPM1KQ8N3J5 372 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 KIAA1958Q8N8K9 716 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 CARD11Q9BXL7 1154 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 SLC4A7Q9Y6M7 1214 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 HECW1Q76N89 1606 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 CCDC18Q5T9S5 1454 aa5.76□□□□□ -1.49
NUP88-202ENST00000570937 CEP162Q5TB80 1403 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 MAGI3Q5TCQ9 1506 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 MAP3K4Q9Y6R4 1608 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 B4GALT4O60513 344 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 KPNA6O60684 536 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 BUD31P41223 144 aaPredicted RBP5.75□□□□□ -1.49
NUP88-202ENST00000570937 NEK4P51957 841 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 CD83Q01151 205 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 PLP2Q04941 152 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 EPHA7Q15375 998 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 ZNF827Q17R98 1081 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 CNNM4Q6P4Q7 775 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 ARHGEF18Q6ZSZ5 1173 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 NME9Q86XW9 330 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 AHI1Q8N157 1196 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 SCYL1Q96KG9 808 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 TARS2Q9BW92 718 aaKnown RBP5.75□□□□□ -1.49
NUP88-202ENST00000570937 PCIF1Q9H4Z3 704 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 SEC61A2Q9H9S3 476 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 ZKSCAN5Q9Y2L8 839 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
NUP88-202ENST00000570937 SPO11Q9Y5K1 396 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 CFAP43Q8NDM7 1665 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 TSPOAP1O95153 1857 aa5.75□□□□□ -1.49
NUP88-202ENST00000570937 A0A0G2JNJ9 132 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 GSG1L2A8MUP6 293 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 CNOT4O95628 575 aaKnown RBP5.74□□□□□ -1.49
NUP88-202ENST00000570937 PRLP01236 227 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 ZNF888P0CJ79 500 aaPredicted RBP5.74□□□□□ -1.49
NUP88-202ENST00000570937 ATP2A2P16615 1042 aaKnown RBP5.74□□□□□ -1.49
NUP88-202ENST00000570937 HSD3B2P26439 372 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 APEX1P27695 318 aaKnown RBP5.74□□□□□ -1.49
NUP88-202ENST00000570937 EFEMP1Q12805 493 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 EFCAB2Q5VUJ9 269 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 TRIM68Q6AZZ1 485 aa5.74□□□□□ -1.49
NUP88-202ENST00000570937 IFNL2Q8IZJ0 200 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms