RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 POSTNQ15063 836 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 CAMK4Q16566 473 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 UGCGQ16739 394 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 XKR3Q5GH77 459 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 B3GNT9Q6UX72 402 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 ABHD15Q6UXT9 468 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 GPBP1Q86WP2 473 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 TRIM50Q86XT4 487 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 C4orf19Q8IY42 314 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 RDH13Q8NBN7 331 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 PCSK9Q8NBP7 692 aaKnown RBP7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 TRPV1Q8NER1 839 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 AFAP1L1Q8TED9 768 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 PIGOQ8TEQ8 1089 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 SLC7A3Q8WY07 619 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 CEP170P1Q96L14 293 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 TIGD1Q96MW7 591 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 BHMT2Q9H2M3 363 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 NRBP2Q9NSY0 501 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 SERTAD1Q9UHV2 236 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 MYH7BA7E2Y1 1941 aa7.33□□□□□ -1.24
CTDNEP1-204ENST00000570484 MGAMO43451 1857 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PLXNA1Q9UIW2 1896 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 A0A087X0B3 334 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 GSTTP1A0A1W2PQM5 241 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 A6NJR5 290 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 E9PMD0 336 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PPFIA4O75335 1185 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 LGR5O75473 907 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 SLITRK3O94933 977 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 LETM1O95202 739 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ATG7O95352 703 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 LYPLA2O95372 231 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 EYA4O95677 639 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PGK1P00558 417 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 IGHA2P01877 340 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 MYL1P05976 194 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PLA2G4BP0C869 781 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 CCL5P13501 91 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 IDEP14735 1019 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PTGS1P23219 599 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 RFC5P40937 340 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 POLGP54098 1239 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 GJA9P57773 515 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 BEX3Q00994 111 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 SNW1Q13573 536 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 MCM6Q14566 821 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 MTERF2Q49AM1 385 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 XKR9Q5GH70 373 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 GNASQ5JWF2 1037 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 TMEM63BQ5T3F8 832 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PLA2G4FQ68DD2 849 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 NYAP1Q6ZVC0 841 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PLPPR4Q7Z2D5 763 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 EXOC8Q8IYI6 725 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ARRDC4Q8NCT1 418 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ENGASEQ8NFI3 743 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ATP8B4Q8TF62 1192 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 SMARCE1Q969G3 411 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PNMA5Q96PV4 448 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 HSD17B14Q9BPX1 270 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 JPH2Q9BR39 696 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 RNF208Q9H0X6 261 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 UPF3AQ9H1J1 476 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ZHX3Q9H4I2 956 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 BCAS3Q9H6U6 928 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ATP6V0A4Q9HBG4 840 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 ANKEF1Q9NU02 776 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 EXOC1Q9NV70 894 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 RMND1Q9NWS8 449 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 KCND2Q9NZV8 630 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 DBR1Q9UK59 544 aaKnown RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
CTDNEP1-204ENST00000570484 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 MOXD2PA6NHM9 499 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 H3BRB1 525 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 HOXA2O43364 376 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 HBP1O60381 514 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 CABYRO75952 493 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 FAM13AO94988 1023 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 F2P00734 622 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 CFHP08603 1231 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 XRCC6P12956 609 aaKnown RBP eCLIP7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 HOXD8P13378 290 aaPredicted RBP7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 CST5P28325 142 aaPredicted RBP7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 RARRES1P49788 294 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 IGBP1P78318 339 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 TBC1D8BQ0IIM8 1120 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 PPFIA1Q13136 1202 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 EMC2Q15006 297 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 KIAA0753Q2KHM9 967 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 LONRF3Q496Y0 759 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 NAALADL2Q58DX5 795 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 FAM47CQ5HY64 1035 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 SASS6Q6UVJ0 657 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 KCNK18Q7Z418 384 aa7.31□□□□□ -1.24
CTDNEP1-204ENST00000570484 GRAMD1CQ8IYS0 662 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms