RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 RFC2P35250 354 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 SLC26A2P50443 739 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
GTF3C1-212ENST00000570129 CEBPZQ03701 1054 aaKnown RBP11□□□□□ -0.65
GTF3C1-212ENST00000570129 GRIN2CQ14957 1233 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 XKR9Q5GH70 373 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 SPECC1Q5M775 1068 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 CNKSR3Q6P9H4 555 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 USP49Q70CQ1 688 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 MAEAQ7L5Y9 396 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 RPAINQ86UA6 219 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 SLFN12Q8IYM2 578 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 CCDC155Q8N6L0 562 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 RDM1Q8NG50 284 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 GUCD1Q96NT3 240 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 SEMA6BQ9H3T3 888 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 GPRC5CQ9NQ84 441 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 XPNPEP1Q9NQW7 623 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 CYP26B1Q9NR63 512 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
GTF3C1-212ENST00000570129 PADI3Q9ULW8 664 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 USP20Q9Y2K6 914 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 TRPV2Q9Y5S1 764 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 MAFO75444 373 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 DNAJB2P25686 324 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 YWHABP31946 246 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 SMAD3P84022 425 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 TAF2Q6P1X5 1199 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 FAM228AQ86W67 206 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 HERC6Q8IVU3 1022 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 C4orf19Q8IY42 314 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 ASAP3Q8TDY4 903 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 CEP170P1Q96L14 293 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 PNMA5Q96PV4 448 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 NAP1L4Q99733 375 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 IFIH1Q9BYX4 1025 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 MINDY3Q9H8M7 445 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 MTMR10Q9NXD2 777 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 SUCLA2Q9P2R7 463 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 AKT3Q9Y243 479 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 ZDHHC9Q9Y397 364 aa10.99□□□□□ -0.65
GTF3C1-212ENST00000570129 A0A087WZ62 844 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 CA3P07451 260 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 MARCKSP29966 332 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 TRAPPC10P48553 1259 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 GPC3P51654 580 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 IKBKEQ14164 716 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 PTPAQ15257 358 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 SF3A1Q15459 793 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 MYOCDQ8IZQ8 938 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 PRPF31Q8WWY3 499 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 SEPT8Q92599 483 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 INTS4Q96HW7 963 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 CLIC6Q96NY7 704 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 FDXACB1Q9BRP7 624 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 ZSWIM4Q9H7M6 989 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 NOL7Q9UMY1 257 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 ST3GAL5Q9UNP4 418 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 COL1A2P08123 1366 aa10.98□□□□□ -0.65
GTF3C1-212ENST00000570129 EVPLQ92817 2033 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 NPHP3-ACAD11A0A0J9YXS1 232 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 VWA3AA6NCI4 1184 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 E9PMD0 336 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 STX6O43752 255 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.652e-12■■■□□ 18
GTF3C1-212ENST00000570129 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 ADGRE1Q14246 886 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 LONRF3Q496Y0 759 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 IER5Q5VY09 327 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 TSHZ1Q6ZSZ6 1077 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 RHPN2Q8IUC4 686 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 HSCBQ8IWL3 235 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 IGSF22Q8N9C0 903 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 MYLIPQ8WY64 445 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 BSNDQ8WZ55 320 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 TIFAQ96CG3 184 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 FAM167AQ96KS9 214 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 USP28Q96RU2 1077 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 CDX2Q99626 313 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 PRDM12Q9H4Q4 367 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 DHX33Q9H6R0 707 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 LRWD1Q9UFC0 647 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 SIP14410 1827 aa10.97□□□□□ -0.65
GTF3C1-212ENST00000570129 KAT6AQ92794 2004 aa10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 PTPRSQ13332 1948 aa10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 ABHD14A-ACY1A0A1B0GW23 586 aa10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 MAGEB2O15479 319 aa10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 USO1O60763 962 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 LYPLA2O95372 231 aa10.96□□□□□ -0.65
GTF3C1-212ENST00000570129 PFKMP08237 780 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms