RNA–Protein interactions for RNA: ENST00000569930.1

TSC2-226, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 2,621 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-226ENST00000569930 SMIM23A6NLE4 172 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 SKAP2O75563 359 aaPredicted RBP20.24■□□□□ 0.83
TSC2-226ENST00000569930 FGGP02679 453 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 UCHL3P15374 230 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 PDIA5Q14554 519 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 SCFD1Q8WVM8 642 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 ELAC2Q9BQ52 826 aaKnown RBP20.24■□□□□ 0.83
TSC2-226ENST00000569930 KCTD10Q9H3F6 313 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
TSC2-226ENST00000569930 HOXA10P31260 410 aaPredicted RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 HOOK3Q86VS8 718 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 SH3RF3Q8TEJ3 882 aaPredicted RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 RSRC1Q96IZ7 334 aaKnown RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 TRIM6Q9C030 488 aaPredicted RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 EBF2Q9HAK2 575 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 PCDHA2Q9Y5H9 948 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 ASAP2O43150 1006 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 BBOX1O75936 387 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 PDE6BP35913 854 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 MMP13P45452 471 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 AJAP1Q9UKB5 411 aaPredicted RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 AGAP1Q9UPQ3 857 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 E9PMD0 336 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 GSTA1P08263 222 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 RASA1P20936 1047 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 HOXA7P31268 230 aaPredicted RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 HIBADHP31937 336 aaKnown RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 IFI35P80217 286 aaPredicted RBP20.23■□□□□ 0.83
TSC2-226ENST00000569930 ITIH4Q14624 930 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 COA7Q96BR5 231 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 UIMC1Q96RL1 719 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 CRAMP1Q96RY5 1269 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 AZI2Q9H6S1 392 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 HDAC9Q9UKV0 1011 aa20.23■□□□□ 0.83
TSC2-226ENST00000569930 SPDYE3A6NKU9 549 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 H2AFZP0C0S5 128 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 H2AFVQ71UI9 128 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 RNF25Q96BH1 459 aaPredicted RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 HES6Q96HZ4 224 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 PRMT1Q99873 361 aaKnown RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 SAP30BPQ9UHR5 308 aaKnown RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 FLOT1O75955 427 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 SATB1Q01826 763 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 HERC4Q5GLZ8 1057 aaPredicted RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 UBAP2Q5T6F2 1119 aaKnown RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 FMNL3Q8IVF7 1028 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 PDGFDQ9GZP0 370 aaPredicted RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 EMILIN3Q9NT22 766 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 ZDHHC18Q9NUE0 388 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 ABCF3Q9NUQ8 709 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 NENFQ9UMX5 172 aa20.22■□□□□ 0.83
TSC2-226ENST00000569930 BZW2Q9Y6E2 419 aaKnown RBP20.22■□□□□ 0.83
TSC2-226ENST00000569930 FAM170AA1A519 330 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 ANP32DO95626 131 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 PMS2P54278 862 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 TRPM8Q7Z2W7 1104 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 LMBR1Q8WVP7 490 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 SAMD15Q9P1V8 674 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 NR2F2P24468 414 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 PON1P27169 355 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 SLC8A3P57103 927 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
TSC2-226ENST00000569930 CRELD2Q6UXH1 353 aaPredicted RBP20.21■□□□□ 0.83
TSC2-226ENST00000569930 AGAP11Q8TF27 550 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
TSC2-226ENST00000569930 GLG1Q92896 1179 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 OSGEPQ9NPF4 335 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
TSC2-226ENST00000569930 GGT7Q9UJ14 662 aa20.21■□□□□ 0.83
TSC2-226ENST00000569930 DDX3XO00571 662 aaKnown RBP eCLIP20.2■□□□□ 0.82
TSC2-226ENST00000569930 CETN3O15182 167 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 VIMP08670 466 aaKnown RBP20.2■□□□□ 0.82
TSC2-226ENST00000569930 NUDT17P0C025 328 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 SEPT2Q15019 361 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 DCAF12L1Q5VU92 463 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 LRCH2Q5VUJ6 765 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 CCDC65Q8IXS2 484 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 RAB17Q9H0T7 212 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 PABPC3Q9H361 631 aaKnown RBP20.2■□□□□ 0.82
TSC2-226ENST00000569930 INTS9Q9NV88 658 aaKnown RBP20.2■□□□□ 0.82
TSC2-226ENST00000569930 AMFRQ9UKV5 643 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 C15orf41Q9Y2V0 281 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 PRKCIP41743 596 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 IFNAR2P48551 515 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 TNNI2P48788 182 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 PLTPP55058 493 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 KCNJ2P63252 427 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 DR1Q01658 176 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 RIPK1Q13546 671 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 SPDYCQ5MJ68 293 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 DUPD1Q68J44 220 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 NAIF1Q69YI7 327 aaPredicted RBP20.2■□□□□ 0.82
TSC2-226ENST00000569930 GJB7Q6PEY0 223 aa20.2■□□□□ 0.82
TSC2-226ENST00000569930 ZC3H3Q8IXZ2 948 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms