RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 LENG9Q96B70 501 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 ATP6V1G3Q96LB4 118 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 PSMB7Q99436 277 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 NUP58Q9BVL2 599 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 SMARCAL1Q9NZC9 954 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
SPG7-222ENST00000569820 STK17AQ9UEE5 414 aa13.08□□□□□ -0.32
SPG7-222ENST00000569820 TRIM49BA6NDI0 452 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 CTNND1O60716 968 aaKnown RBP13.07□□□□□ -0.32
SPG7-222ENST00000569820 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
SPG7-222ENST00000569820 CXCR5P32302 372 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 GCKP35557 465 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 SLC8A3P57103 927 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 ZBED6P86452 979 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 PAK2Q13177 524 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 CD302Q8IX05 232 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 CCDC42Q96M95 316 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 C7orf25Q9BPX7 421 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 TTYH3Q9C0H2 523 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 KIAA1683Q9H0B3 1180 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 MYH10P35580 1976 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 SLC8A1P32418 973 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 C1QTNF12Q5T7M4 302 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 DRAXINQ8NBI3 349 aaPredicted RBP13.07□□□□□ -0.32
SPG7-222ENST00000569820 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 THOC1Q96FV9 657 aaKnown RBP13.07□□□□□ -0.32
SPG7-222ENST00000569820 ATP6V0A4Q9HBG4 840 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 PPANQ9NQ55 473 aaKnown RBP13.07□□□□□ -0.32
SPG7-222ENST00000569820 GPRC5DQ9NZD1 345 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 EHD2Q9NZN4 543 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 NFU1Q9UMS0 254 aa13.07□□□□□ -0.32
SPG7-222ENST00000569820 EME2A4GXA9 379 aaPredicted RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 B4DLN1 442 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FAM86B1E9PN63 330 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 WDR46O15213 610 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 MOCS3O95396 460 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FAM86B2P0C5J1 330 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 CIITAP33076 1130 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 CARSP49589 748 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 ITGB3BPQ13352 177 aaPredicted RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 DGKZQ13574 1117 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 ECM1Q16610 540 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 Q4G0T1 1027 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FAM228AQ86W67 206 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 ADSSL1Q8N142 457 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 MREGQ8N565 214 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 ARFGAP2Q8N6H7 521 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 LARP4BQ92615 738 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 LPAR1Q92633 364 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 CDK5RAP3Q96JB5 506 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 IFIH1Q9BYX4 1025 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 MLXIPQ9HAP2 919 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 HOMER3Q9NSC5 361 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 RBM12Q9NTZ6 932 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 TPX2Q9ULW0 747 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FAM153BP0C7A2 387 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 LMNB1P20700 586 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 E2F5Q15329 346 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FAM153CQ494X1 144 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 HYIQ5T013 277 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 KRT26Q7Z3Y9 468 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 TBC1D5Q92609 795 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 RAD54LQ92698 747 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
SPG7-222ENST00000569820 UIMC1Q96RL1 719 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 THAP9Q9H5L6 903 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FAM153AQ9UHL3 310 aa13.06□□□□□ -0.32
SPG7-222ENST00000569820 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 ZNF263O14978 683 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 MARCH6O60337 910 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 AP1G2O75843 785 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 GLI1P08151 1106 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 CYP3A4P08684 503 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 HPDP32754 393 aaPredicted RBP13.05□□□□□ -0.32
SPG7-222ENST00000569820 ASIC1P78348 528 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 CDK17Q00537 523 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 IFFO1Q0D2I5 559 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 PRR16Q569H4 304 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 ANKRD20A8PQ5CZ79 823 aa13.05□□□□□ -0.32
SPG7-222ENST00000569820 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms