RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	MSX2	P35548	267 aa	Predicted RBP	5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	RBM25	P49756	843 aa	Known RBP	5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	JAM2	P57087	298 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	RBL2	Q08999	1139 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	COLEC12	Q5KU26	742 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	FOXB2	Q5VYV0	432 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	SYCE2	Q6PIF2	218 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	NELFA	Q9H3P2	528 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	SMURF1	Q9HCE7	757 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	ZNHIT2	Q9UHR6	403 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	MRPS23	Q9Y3D9	190 aa	Known RBP	5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	NR2E1	Q9Y466	385 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	ARHGAP6	O43182	974 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	CRTAM	O95727	393 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	LMNA	P02545	664 aa	Known RBP	5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	GC	P02774	474 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	FAM153B	P0C7A2	387 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	ECE1	P42892	770 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	IL13RA1	P78552	427 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	SERINC3	Q13530	473 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	TRIM61	Q5EBN2	209 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	SOGA3	Q5TF21	947 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	PRIMA1	Q86XR5	153 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	JMY	Q8N9B5	988 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	GSTCD	Q8NEC7	633 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	WDR48	Q8TAF3	677 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	EXOC2	Q96KP1	924 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	C8orf37	Q96NL8	207 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	CELF4	Q9BZC1	486 aa	Known RBP	5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	PFDN2	Q9UHV9	154 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	PCDHA9	Q9Y5H5	950 aa		5.31	□□□□□ -1.56
UBR1-209	ENST00000569243	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	DIAPH1	O60610	1272 aa	Known RBP	5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	MPIG6B	O95866	241 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	HMGCR	P04035	888 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	KANK2	Q63ZY3	851 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	TMEM200B	Q69YZ2	307 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	USP30	Q70CQ3	517 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	SGMS1	Q86VZ5	419 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	TMPRSS6	Q8IU80	811 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	TANGO6	Q9C0B7	1094 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	OR10A5	Q9H207	317 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	KCNH7	Q9NS40	1196 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	GIT1	Q9Y2X7	761 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	ASB1	Q9Y576	335 aa		5.3	□□□□□ -1.56
UBR1-209	ENST00000569243	KDM2B	Q8NHM5	1336 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243		A0A0G2JNJ9	132 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	MATN2	O00339	956 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	RPS6KA4	O75676	772 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	SRGAP2C	P0DJJ0	459 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	CDK4	P11802	303 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	KRT15	P19012	456 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	SDHA	P31040	664 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	RRAD	P55042	308 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	NOSTRIN	Q8IVI9	506 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	DLG3	Q92796	817 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	MKL1	Q969V6	931 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	AMN	Q9BXJ7	453 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	OR10A2	Q9H208	303 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.29	□□□□□ -1.56
UBR1-209	ENST00000569243		Q9UFV3	132 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	PUF60	Q9UHX1	559 aa	Known RBP	5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	VWA7	Q9Y334	891 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243	B3GALT1	Q9Y5Z6	326 aa		5.29	□□□□□ -1.56
UBR1-209	ENST00000569243		A0A0A6YYK5	440 aa	Predicted RBP	5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	PRAMEF25	A6NGN4	478 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	RASA3	Q14644	834 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	MBNL2	Q5VZF2	373 aa	Known RBP	5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	ADGRE4P	Q86SQ3	457 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	CALML6	Q8TD86	181 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	CFHR4	Q92496	578 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	LPP	Q93052	612 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	BBC3	Q96PG8	261 aa	Predicted RBP	5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	PLA2G3	Q9NZ20	509 aa		5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	HECA	Q9UBI9	543 aa	Predicted RBP	5.28	□□□□□ -1.56
UBR1-209	ENST00000569243	PROB1	E7EW31	1015 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	PEX11B	O96011	259 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	MEOX1	P50221	254 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	DNM2	P50570	870 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	KCNQ1	P51787	676 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	HHEX	Q03014	270 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	HGFAC	Q04756	655 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	SEC23A	Q15436	765 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	GRAMD4	Q6IC98	578 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	ZSWIM2	Q8NEG5	633 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	DEPDC7	Q96QD5	511 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	MRPL4	Q9BYD3	311 aa	Known RBP	5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	SLC52A2	Q9HAB3	445 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	GPRC5B	Q9NZH0	403 aa		5.27	□□□□□ -1.57
UBR1-209	ENST00000569243	GOLGA6L22	H0YM25	854 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	MRE11	P49959	708 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	SESN2	P58004	480 aa	Predicted RBP	5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	KRTAP10-6	P60371	365 aa	Predicted RBP	5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	CD83	Q01151	205 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	MAP3K12	Q12852	859 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	MOGS	Q13724	837 aa		5.26	□□□□□ -1.57
UBR1-209	ENST00000569243	PCOLCE	Q15113	449 aa		5.26	□□□□□ -1.57

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