RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 POTEDQ86YR6 584 aa8.82□□□□□ -1
CDH3-209ENST00000569080 LRRC71Q8N4P6 559 aa8.82□□□□□ -1
CDH3-209ENST00000569080 FBXO22Q8NEZ5 403 aa8.82□□□□□ -1
CDH3-209ENST00000569080 SAMD11Q96NU1 681 aa8.82□□□□□ -1
CDH3-209ENST00000569080 ASB2Q96Q27 587 aa8.82□□□□□ -1
CDH3-209ENST00000569080 PPP1R16BQ96T49 567 aa8.82□□□□□ -1
CDH3-209ENST00000569080 OSMRQ99650 979 aa8.82□□□□□ -1
CDH3-209ENST00000569080 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
CDH3-209ENST00000569080 ADAMTS10Q9H324 1103 aa8.82□□□□□ -1
CDH3-209ENST00000569080 LMCD1Q9NZU5 365 aa8.82□□□□□ -1
CDH3-209ENST00000569080 WRAP73Q9P2S5 460 aaPredicted RBP8.82□□□□□ -1
CDH3-209ENST00000569080 TCEAL9Q9UHQ7 104 aa8.82□□□□□ -1
CDH3-209ENST00000569080 PLXNA4Q9HCM2 1894 aa8.81□□□□□ -1
CDH3-209ENST00000569080 IGKV6-21A0A0C4DH24 114 aa8.81□□□□□ -1
CDH3-209ENST00000569080 C9IYK1 514 aa8.81□□□□□ -1
CDH3-209ENST00000569080 H3BNC9 293 aa8.81□□□□□ -1
CDH3-209ENST00000569080 TBX3O15119 743 aa8.81□□□□□ -1
CDH3-209ENST00000569080 MAGEB2O15479 319 aa8.81□□□□□ -1
CDH3-209ENST00000569080 EIF5BO60841 1220 aaKnown RBP8.81□□□□□ -1
CDH3-209ENST00000569080 MMP1P03956 469 aa8.81□□□□□ -1
CDH3-209ENST00000569080 XBP1P17861 261 aa8.81□□□□□ -1
CDH3-209ENST00000569080 KRT2P35908 639 aa8.81□□□□□ -1
CDH3-209ENST00000569080 CRYBB1P53674 252 aaPredicted RBP8.81□□□□□ -1
CDH3-209ENST00000569080 DSC3Q14574 896 aa8.81□□□□□ -1
CDH3-209ENST00000569080 COL19A1Q14993 1142 aa8.81□□□□□ -1
CDH3-209ENST00000569080 ANO5Q75V66 913 aa8.81□□□□□ -1
CDH3-209ENST00000569080 TRMT1LQ7Z2T5 733 aaKnown RBP8.81□□□□□ -1
CDH3-209ENST00000569080 MIER3Q7Z3K6 550 aa8.81□□□□□ -1
CDH3-209ENST00000569080 NPAS4Q8IUM7 802 aa8.81□□□□□ -1
CDH3-209ENST00000569080 TMEM192Q8IY95 271 aa8.81□□□□□ -1
CDH3-209ENST00000569080 BANK1Q8NDB2 785 aa8.81□□□□□ -1
CDH3-209ENST00000569080 WASF1Q92558 559 aa8.81□□□□□ -1
CDH3-209ENST00000569080 FAM20AQ96MK3 541 aa8.81□□□□□ -1
CDH3-209ENST00000569080 ST3GAL5Q9UNP4 418 aa8.81□□□□□ -1
CDH3-209ENST00000569080 GINS2Q9Y248 185 aa8.81□□□□□ -1
CDH3-209ENST00000569080 BTBD18B2RXH4 712 aa8.8□□□□□ -1
CDH3-209ENST00000569080 CCNT1O60563 726 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 RPS6KA5O75582 802 aa8.8□□□□□ -1
CDH3-209ENST00000569080 SARSP49591 514 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 RBM25P49756 843 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 GATMP50440 423 aa8.8□□□□□ -1
CDH3-209ENST00000569080 GPC3P51654 580 aa8.8□□□□□ -1
CDH3-209ENST00000569080 MRPS5P82675 430 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 XKR3Q5GH77 459 aa8.8□□□□□ -1
CDH3-209ENST00000569080 PLA2G4FQ68DD2 849 aa8.8□□□□□ -1
CDH3-209ENST00000569080 EFCAB12Q6NXP0 572 aa8.8□□□□□ -1
CDH3-209ENST00000569080 FAM43BQ6ZT52 329 aaPredicted RBP8.8□□□□□ -1
CDH3-209ENST00000569080 DIS3L2Q8IYB7 885 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 CMTR2Q8IYT2 770 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 FIBCD1Q8N539 461 aa8.8□□□□□ -1
CDH3-209ENST00000569080 METTL13Q8N6R0 699 aa8.8□□□□□ -1
CDH3-209ENST00000569080 MRPL38Q96DV4 380 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 SH2D3AQ9BRG2 576 aa8.8□□□□□ -1
CDH3-209ENST00000569080 RGS18Q9NS28 235 aa8.8□□□□□ -1
CDH3-209ENST00000569080 RNF19AQ9NV58 838 aa8.8□□□□□ -1
CDH3-209ENST00000569080 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
CDH3-209ENST00000569080 LIMCH1Q9UPQ0 1083 aa8.8□□□□□ -1
CDH3-209ENST00000569080 MRPL42Q9Y6G3 142 aaKnown RBP8.8□□□□□ -1
CDH3-209ENST00000569080 MYO7AQ13402 2215 aa8.8□□□□□ -1
CDH3-209ENST00000569080 TCF20Q9UGU0 1960 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 BMP1P13497 986 aa8.79□□□□□ -1
CDH3-209ENST00000569080 DARSP14868 501 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 EIF4BP23588 611 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 CTNNB1P35222 781 aa8.79□□□□□ -1
CDH3-209ENST00000569080 BMPR1AP36894 532 aa8.79□□□□□ -1
CDH3-209ENST00000569080 KCNQ1P51787 676 aa8.79□□□□□ -1
CDH3-209ENST00000569080 FOSBP53539 338 aa8.79□□□□□ -1
CDH3-209ENST00000569080 NLRP11P59045 1033 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 PSMC5P62195 406 aa8.79□□□□□ -1
CDH3-209ENST00000569080 FAM189BP81408 668 aa8.79□□□□□ -1
CDH3-209ENST00000569080 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
CDH3-209ENST00000569080 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 GPM6BQ13491 265 aa8.79□□□□□ -1
CDH3-209ENST00000569080 CAMK1Q14012 370 aa8.79□□□□□ -1
CDH3-209ENST00000569080 BTG3Q14201 252 aaPredicted RBP8.79□□□□□ -1
CDH3-209ENST00000569080 MTERF2Q49AM1 385 aa8.79□□□□□ -1
CDH3-209ENST00000569080 CCDC83Q8IWF9 413 aa8.79□□□□□ -1
CDH3-209ENST00000569080 ZNF579Q8NAF0 562 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
CDH3-209ENST00000569080 MAP7D2Q96T17 732 aa8.79□□□□□ -1
CDH3-209ENST00000569080 NAP1L4Q99733 375 aaKnown RBP8.79□□□□□ -1
CDH3-209ENST00000569080 ADAM2Q99965 735 aa8.79□□□□□ -1
CDH3-209ENST00000569080 LXNQ9BS40 222 aa8.79□□□□□ -1
CDH3-209ENST00000569080 C1orf112Q9NSG2 853 aa8.79□□□□□ -1
CDH3-209ENST00000569080 NRBP2Q9NSY0 501 aa8.79□□□□□ -1
CDH3-209ENST00000569080 HCSTQ9UBK5 93 aa8.79□□□□□ -1
CDH3-209ENST00000569080 COG5Q9UP83 839 aa8.79□□□□□ -1
CDH3-209ENST00000569080 AKT3Q9Y243 479 aa8.79□□□□□ -1
CDH3-209ENST00000569080 RWDD3Q9Y3V2 267 aa8.79□□□□□ -1
CDH3-209ENST00000569080 GPR182O15218 404 aa8.78□□□□□ -1
CDH3-209ENST00000569080 GRM6O15303 877 aa8.78□□□□□ -1
CDH3-209ENST00000569080 MAFO75444 373 aaPredicted RBP8.78□□□□□ -1
CDH3-209ENST00000569080 RB1P06400 928 aa8.78□□□□□ -1
CDH3-209ENST00000569080 ATF7P17544 494 aaPredicted RBP8.78□□□□□ -1
CDH3-209ENST00000569080 TMOD1P28289 359 aa8.78□□□□□ -1
CDH3-209ENST00000569080 QARSP47897 775 aaKnown RBP8.78□□□□□ -1
CDH3-209ENST00000569080 NPEPPSP55786 919 aa8.78□□□□□ -1
CDH3-209ENST00000569080 SKIV2LQ15477 1246 aaKnown RBP8.78□□□□□ -1
CDH3-209ENST00000569080 PAN2Q504Q3 1202 aaKnown RBP8.78□□□□□ -1
CDH3-209ENST00000569080 TIGD5Q53EQ6 642 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms