RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TPD52L2O43399 206 aaKnown RBP7.47□□□□□ -1.21
UBR1-208ENST00000569066 WNT11O96014 354 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 MYL1P05976 194 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 ZNF200P98182 395 aaPredicted RBP7.47□□□□□ -1.21
UBR1-208ENST00000569066 ALDH6A1Q02252 535 aaKnown RBP7.47□□□□□ -1.21
UBR1-208ENST00000569066 NOLC1Q14978 699 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR1-208ENST00000569066 SNX17Q15036 470 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 ARHGAP29Q52LW3 1261 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 PPP4R4Q6NUP7 873 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 TAAR9Q96RI9 348 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 A6NNZ2 444 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 PTGS1P23219 599 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 KIF23Q02241 960 aaPredicted RBP7.46□□□□□ -1.22
UBR1-208ENST00000569066 TMC5Q6UXY8 1006 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 NME9Q86XW9 330 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 MIB1Q86YT6 1006 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 TSPAN17Q96FV3 270 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 AIFM3Q96NN9 605 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 RPS6KC1Q96S38 1066 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 MTG2Q9H4K7 406 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 RIPOR2Q9Y4F9 1068 aa7.46□□□□□ -1.22
UBR1-208ENST00000569066 MPOP05164 745 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 PFKPQ01813 784 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 GTF2H3Q13889 308 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 UAP1L1Q3KQV9 507 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 TOE1Q96GM8 510 aaKnown RBP7.45□□□□□ -1.22
UBR1-208ENST00000569066 MAML3Q96JK9 1138 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 NUP88Q99567 741 aaPredicted RBP7.45□□□□□ -1.22
UBR1-208ENST00000569066 FAM50BQ9Y247 325 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 PFKMP08237 780 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 ADCY2Q08462 1091 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 ADCY1Q08828 1119 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 MUM1Q2TAK8 710 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 ETV3LQ6ZN32 361 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 STK32CQ86UX6 486 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 AMIGO3Q86WK7 504 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 AGBL5Q8NDL9 886 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 SLC35G2Q8TBE7 412 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 ACO2Q99798 780 aaKnown RBP7.45□□□□□ -1.22
UBR1-208ENST00000569066 NMRK2Q9NPI5 230 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 DMRT3Q9NQL9 472 aa7.45□□□□□ -1.22
UBR1-208ENST00000569066 IGHA1P01876 353 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 KIAA1841Q6NSI8 718 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 LILRA6Q6PI73 481 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 ZC3H14Q6PJT7 736 aaKnown RBP7.44□□□□□ -1.22
UBR1-208ENST00000569066 SLC41A1Q8IVJ1 513 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 FAM126BQ8IXS8 530 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 ALG3Q92685 438 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 RUNDC1Q96C34 613 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 FOXB1Q99853 325 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 INCENPQ9NQS7 918 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 EVLQ9UI08 416 aaPredicted RBP7.44□□□□□ -1.22
UBR1-208ENST00000569066 KCNG1Q9UIX4 513 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 USP18Q9UMW8 372 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 CD300LDQ6UXZ3 194 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 KANSL1Q7Z3B3 1105 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 TMC6Q7Z403 805 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 MIER2Q8N344 545 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 MAGEL2Q9UJ55 1249 aa7.44□□□□□ -1.22
UBR1-208ENST00000569066 ZBTB7AO95365 584 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 NCKAP1LP55160 1127 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 PPARAQ07869 468 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 BIRC2Q13490 618 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 FRMPD2Q68DX3 1309 aaPredicted RBP7.43□□□□□ -1.22
UBR1-208ENST00000569066 IL31Q6EBC2 164 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 TIGD7Q6NT04 549 aaPredicted RBP7.43□□□□□ -1.22
UBR1-208ENST00000569066 GRAMD1CQ8IYS0 662 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 ZBTB34Q8NCN2 500 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 AUTS2Q8WXX7 1259 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 PSMD1Q99460 953 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 PRDM11Q9NQV5 511 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 PRSS50Q9UI38 385 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 DNM3Q9UQ16 869 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 ST20-MTHFSA0A0A6YYL1 179 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 ZNF839A8K0R7 811 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 MRPS9P82933 396 aaKnown RBP7.43□□□□□ -1.22
UBR1-208ENST00000569066 RBM10P98175 930 aaKnown RBP7.43□□□□□ -1.22
UBR1-208ENST00000569066 ROM1Q03395 351 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 NR1I3Q14994 352 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 SKIDA1Q1XH10 827 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 MBNL2Q5VZF2 373 aaKnown RBP7.43□□□□□ -1.22
UBR1-208ENST00000569066 ZSWIM3Q96MP5 696 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 IFT122Q9HBG6 1241 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 LIMCH1Q9UPQ0 1083 aa7.43□□□□□ -1.22
UBR1-208ENST00000569066 MYPNQ86TC9 1320 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 PLIN1O60240 522 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 POU2F2P09086 479 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 NEK3P51956 506 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 GBX1Q14549 363 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 SLC9A5Q14940 896 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 PPP1R35Q8TAP8 253 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 DIS3LQ8TF46 1054 aaKnown RBP7.42□□□□□ -1.22
UBR1-208ENST00000569066 COA7Q96BR5 231 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 CSRNP2Q9H175 543 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 NUMBLQ9Y6R0 609 aa7.42□□□□□ -1.22
UBR1-208ENST00000569066 APAF1O14727 1248 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms