RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CDC45O75419 566 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 FGF18O76093 207 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 ERVFC1P60507 584 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 KRT32Q14532 448 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 PKN1Q16512 942 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 TSGA10IPQ3SY00 556 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 HERC4Q5GLZ8 1057 aaPredicted RBP17.6■□□□□ 0.41
NME3-211ENST00000568561 Q6ZUG5 572 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 SLC24A5Q71RS6 500 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 COLGALT1Q8NBJ5 622 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 BBXQ8WY36 941 aaPredicted RBP17.6■□□□□ 0.41
NME3-211ENST00000568561 BRF1Q92994 677 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 PHKBQ93100 1093 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 FBXL18Q96ME1 805 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 TLR9Q9NR96 1032 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
NME3-211ENST00000568561 MAFBQ9Y5Q3 323 aaPredicted RBP17.6■□□□□ 0.41
NME3-211ENST00000568561 ESYT2A0FGR8 921 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 GPR182O15218 404 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 GPR32O75388 356 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 PBX3P40426 434 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
NME3-211ENST00000568561 RCAN1P53805 252 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
NME3-211ENST00000568561 COASYQ13057 564 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 PLPP4Q5VZY2 271 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 ZNF746Q6NUN9 644 aaPredicted RBP17.59■□□□□ 0.41
NME3-211ENST00000568561 LRRC71Q8N4P6 559 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 JAKMIP1Q96N16 626 aaKnown RBP17.59■□□□□ 0.41
NME3-211ENST00000568561 ZMYND12Q9H0C1 365 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 CWH43Q9H720 699 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 ATP6V0A4Q9HBG4 840 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 C6orf50Q9HD87 102 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 TBC1D22BQ9NU19 505 aa17.59■□□□□ 0.41
NME3-211ENST00000568561 PSAPP07602 524 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 NLRP11P59045 1033 aaKnown RBP17.58■□□□□ 0.4
NME3-211ENST00000568561 NHLH1Q02575 133 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 DSC3Q14574 896 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
NME3-211ENST00000568561 LENG9Q96B70 501 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 AAASQ9NRG9 546 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 RNF19AQ9NV58 838 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 TMEM161AQ9NX61 479 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 AKT3Q9Y243 479 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 SAMM50Q9Y512 469 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 PCDHA10Q9Y5I2 948 aa17.58■□□□□ 0.4
NME3-211ENST00000568561 KMT2EQ8IZD2 1858 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 CHMP2AO43633 222 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 ZNF862O60290 1169 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
NME3-211ENST00000568561 UBE3AQ05086 875 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 UGCGQ16739 394 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 DUSP6Q16828 381 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 ODR4Q5SWX8 454 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 RNF169Q8NCN4 708 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 GJA10Q969M2 543 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 RPGRIP1Q96KN7 1286 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 APOL5Q9BWW9 433 aa17.57■□□□□ 0.4
NME3-211ENST00000568561 NID2Q14112 1375 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 CCDC196A0A1B0GTZ2 297 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 LOC730098B7Z3J9 87 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 FSCN2O14926 492 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 PRPF3O43395 683 aaKnown RBP17.56■□□□□ 0.4
NME3-211ENST00000568561 LAG3P18627 525 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 FGFR4P22455 802 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 FAM189BP81408 668 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 PRKCEQ02156 737 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 EFCAB12Q6NXP0 572 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 LLGL2Q6P1M3 1020 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 LRRC55Q6ZSA7 311 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
NME3-211ENST00000568561 LINC01465Q8N7H1 131 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 CCDC12Q8WUD4 166 aaPredicted RBP17.56■□□□□ 0.4
NME3-211ENST00000568561 EDAQ92838 391 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 MAP7D2Q96T17 732 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 VPS54Q9P1Q0 977 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 SNX14Q9Y5W7 946 aa17.56■□□□□ 0.4
NME3-211ENST00000568561 HIDE1A8MVS5 230 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 WDR64B1ANS9 1081 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 MSH4O15457 936 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 EDIL3O43854 480 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 OATP04181 439 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 MRE11P49959 708 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 FAM167AQ96KS9 214 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 MFSD14AQ96MC6 490 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 CASD1Q96PB1 797 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 TCF25Q9BQ70 676 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 SLC26A6Q9BXS9 759 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 TMEM117Q9H0C3 514 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 ADAMTS10Q9H324 1103 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 ELAC1Q9H777 363 aaKnown RBP17.55■□□□□ 0.4
NME3-211ENST00000568561 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
NME3-211ENST00000568561 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 DISC1Q9NRI5 854 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
NME3-211ENST00000568561 CDH22Q9UJ99 828 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 CEP131Q9UPN4 1083 aa17.55■□□□□ 0.4
NME3-211ENST00000568561 TMEM221A6NGB7 291 aa17.54■□□□□ 0.4
NME3-211ENST00000568561 M0R296 226 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms