RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 ZRSR1Q15695 479 aaKnown RBP14.21□□□□□ -0.13
GINS3-209ENST00000567909 KRT79Q5XKE5 535 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 ARL6IP4Q66PJ3 421 aaKnown RBP14.21□□□□□ -0.13
GINS3-209ENST00000567909 CNKSR3Q6P9H4 555 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 DBF4BQ8NFT6 615 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 SLC7A3Q8WY07 619 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 HERVK_113Q902F9 699 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 ZNF668Q96K58 619 aaPredicted RBP14.21□□□□□ -0.13
GINS3-209ENST00000567909 USP28Q96RU2 1077 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 CEP89Q96ST8 783 aa14.21□□□□□ -0.13
GINS3-209ENST00000567909 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
GINS3-209ENST00000567909 MTIF3Q9H2K0 278 aaKnown RBP14.21□□□□□ -0.13
GINS3-209ENST00000567909 CXXC1Q9P0U4 656 aaPredicted RBP14.21□□□□□ -0.13
GINS3-209ENST00000567909 PTPRSQ13332 1948 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 MAFO75444 373 aaPredicted RBP14.2□□□□□ -0.14
GINS3-209ENST00000567909 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
GINS3-209ENST00000567909 DNM2P50570 870 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 DRP2Q13474 957 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 KIZQ2M2Z5 673 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 TCTN1Q2MV58 587 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 FBXO47Q5MNV8 452 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 LINC01465Q8N7H1 131 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 SEPT8Q92599 483 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 SCLT1Q96NL6 688 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 NACC1Q96RE7 527 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 JPH2Q9BR39 696 aaPredicted RBP14.2□□□□□ -0.14
GINS3-209ENST00000567909 CDHR5Q9HBB8 845 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 ANKEF1Q9NU02 776 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 TFIP11Q9UBB9 837 aaKnown RBP14.2□□□□□ -0.14
GINS3-209ENST00000567909 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
GINS3-209ENST00000567909 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
GINS3-209ENST00000567909 TCHHQ07283 1943 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 RFC5P40937 340 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 NLRP11P59045 1033 aaKnown RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 LPIN1Q14693 890 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 EMC2Q15006 297 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 PTPAQ15257 358 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 ECM1Q16610 540 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 PLEKHG4Q58EX7 1191 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 ZNF396Q96N95 335 aaPredicted RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 OSMRQ99650 979 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 IFIH1Q9BYX4 1025 aaKnown RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 DHX33Q9H6R0 707 aaKnown RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 DDX19AQ9NUU7 478 aaKnown RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 SUCLA2Q9P2R7 463 aaPredicted RBP14.19□□□□□ -0.14
GINS3-209ENST00000567909 KIAA1024Q9UPX6 916 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 PPME1Q9Y570 386 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 SLC4A7Q9Y6M7 1214 aa14.19□□□□□ -0.14
GINS3-209ENST00000567909 IGKV6-21A0A0C4DH24 114 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 ARHGEF35A5YM69 484 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 XRCC6P12956 609 aaKnown RBP eCLIP14.18□□□□□ -0.14
GINS3-209ENST00000567909 MUTP22033 750 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 CD52P31358 61 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 RARRES1P49788 294 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 GRIN1Q05586 938 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 IKBKEQ14164 716 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 STK38Q15208 465 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 RASIP1Q5U651 963 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 FAM109BQ6ICB4 259 aaPredicted RBP14.18□□□□□ -0.14
GINS3-209ENST00000567909 TSHZ1Q6ZSZ6 1077 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 TMEM143Q96AN5 459 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 PLIN2Q99541 437 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 MTRQ99707 1265 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 MMTAG2Q9BU76 263 aaKnown RBP14.18□□□□□ -0.14
GINS3-209ENST00000567909 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
GINS3-209ENST00000567909 ATP6V0A4Q9HBG4 840 aa14.18□□□□□ -0.14
GINS3-209ENST00000567909 KDM3AQ9Y4C1 1321 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 MYH11P35749 1972 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 ABHD14A-ACY1A0A1B0GW23 586 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 GRXCR1A8MXD5 290 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 SOX1O00570 391 aaPredicted RBP14.17□□□□□ -0.14
GINS3-209ENST00000567909 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
GINS3-209ENST00000567909 GPR32O75388 356 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 DGAT1O75907 488 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 UBA7P41226 1012 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 KCNJ6P48051 423 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 CRYBB1P53674 252 aaPredicted RBP14.17□□□□□ -0.14
GINS3-209ENST00000567909 PAK2Q13177 524 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 MAEAQ7L5Y9 396 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 CABP7Q86V35 215 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 RHPN2Q8IUC4 686 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 KSR1Q8IVT5 923 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 NLRP7Q8WX94 980 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 CDK5RAP3Q96JB5 506 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 DBR1Q9UK59 544 aaKnown RBP14.17□□□□□ -0.14
GINS3-209ENST00000567909 PADI3Q9ULW8 664 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 LAMA3Q16787 3333 aa14.17□□□□□ -0.14
GINS3-209ENST00000567909 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 E9PMD0 336 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 GAS2O43903 313 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 RPS6KA5O75582 802 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 BRD1O95696 1058 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 LONP1P36776 959 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 NASPP49321 788 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms