RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 FBXO11Q86XK2 927 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 C4orf32Q8N8J7 132 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 DAGLBQ8NCG7 672 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 MTMR8Q96EF0 704 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 P2RX7Q99572 595 aaKnown RBP6.53□□□□□ -1.36
SF3B3-210ENST00000567654 LZTS2Q9BRK4 669 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 TNMDQ9H2S6 317 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF576Q9H609 170 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 SPON1Q9HCB6 807 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 SH3GLB2Q9NR46 395 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 HERC5Q9UII4 1024 aaKnown RBP6.53□□□□□ -1.36
SF3B3-210ENST00000567654 CNOT7Q9UIV1 285 aaKnown RBP6.53□□□□□ -1.36
SF3B3-210ENST00000567654 HACL1Q9UJ83 578 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 ISY1Q9ULR0 285 aaKnown RBP6.53□□□□□ -1.36
SF3B3-210ENST00000567654 FZD1Q9UP38 647 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 LOXHD1Q8IVV2 1947 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 SMCO2A6NFE2 343 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 SPDYE3A6NKU9 549 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 F5H6K3 240 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 TM4SF5O14894 197 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 FOXN1O15353 648 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 ADAM11O75078 769 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 WISP1O95388 367 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 SPATA31C1P0DKV0 1188 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 SELPP16109 830 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 ERCC3P19447 782 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 CMA1P23946 247 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 RPS12P25398 132 aaKnown RBP6.52□□□□□ -1.37
SF3B3-210ENST00000567654 CHRNA4P43681 627 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 NLRP12P59046 1061 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-210ENST00000567654 KLRC3Q07444 240 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 UBE2SQ16763 222 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 INF2Q27J81 1249 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 QRICH1Q2TAL8 776 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 KIF4BQ2VIQ3 1234 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 FAM117BQ6P1L5 589 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 DLK2Q6UY11 383 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC73Q6ZRK6 1079 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 C11orf57Q6ZUT1 292 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-210ENST00000567654 SPICE1Q8N0Z3 855 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 UBASH3BQ8TF42 649 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 DCAF4Q8WV16 495 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
SF3B3-210ENST00000567654 ZMYND12Q9H0C1 365 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 CSRNP2Q9H175 543 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 TMEM60Q9H2L4 133 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 CLEC4MQ9H2X3 399 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-210ENST00000567654 C12orf49Q9H741 205 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 KANSL2Q9H9L4 492 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 LRRC37A2A6NM11 1700 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 ARID2Q68CP9 1835 aa6.52□□□□□ -1.37
SF3B3-210ENST00000567654 MCM3APO60318 1980 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 TRIM75PA6NK02 468 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 KINO60870 393 aaKnown RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 ZNF202O95125 648 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 ITGB2P05107 769 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 ELNP15502 786 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 ITPKAP23677 461 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 CALML3P27482 149 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 GNA15P30679 374 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 MCM7P33993 719 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 CAP2P40123 477 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 EPS15P42566 896 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 SLC1A4P43007 532 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 GSTM4Q03013 218 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 PSMD2Q13200 908 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 ZYXQ15942 572 aaKnown RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 LONRF3Q496Y0 759 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 ANO6Q4KMQ2 910 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 GPATCH4Q5T3I0 446 aaKnown RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 NBPF12Q5TAG4 269 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 PRAMEF18Q5VWM3 479 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 JAKMIP3Q5VZ66 844 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 GRAMD1CQ8IYS0 662 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 TMEM151AQ8N4L1 468 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 C3orf58Q8NDZ4 430 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 GMCL1P1Q8NEA9 526 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC148Q8NFR7 591 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 DPF2Q92785 391 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 SYT17Q9BSW7 474 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 GPRC5DQ9NZD1 345 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 SEC63Q9UGP8 760 aaKnown RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 NOL7Q9UMY1 257 aaKnown RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 SRPRBQ9Y5M8 271 aaKnown RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 MORC2Q9Y6X9 1032 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-210ENST00000567654 SRCAPQ6ZRS2 3230 aa6.51□□□□□ -1.37
SF3B3-210ENST00000567654 PLXNA1Q9UIW2 1896 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 ESYT2A0FGR8 921 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 VWA3AA6NCI4 1184 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 TMEM232C9JQI7 657 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 DLL1O00548 723 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 ZBTB5O15062 677 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 MYO1BO43795 1136 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 DDNO94850 711 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-210ENST00000567654 ALX3O95076 343 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 LETM1O95202 739 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms