RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SCLT1Q96NL6 688 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 TMEM161AQ9NX61 479 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 ST3GAL5Q9UNP4 418 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 AKT3Q9Y243 479 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 NOC2LQ9Y3T9 749 aaKnown RBP21.01■□□□□ 0.95
LINC01238-205ENST00000567549 CARNS1A5YM72 827 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 OATP04181 439 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 LINC00271P0C7V0 271 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 NTRK3Q16288 839 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 KIZQ2M2Z5 673 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 CTC1Q2NKJ3 1217 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 LRCH2Q5VUJ6 765 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 ADHFE1Q8IWW8 467 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 ABI1Q8IZP0 508 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 TM6SF1Q9BZW5 370 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 EPHX3Q9H6B9 360 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 ALG13Q9NP73 1137 aaKnown RBP21■□□□□ 0.95
LINC01238-205ENST00000567549 VPS54Q9P1Q0 977 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 PCDHA4Q9UN74 947 aa21■□□□□ 0.95
LINC01238-205ENST00000567549 EIF5BO60841 1220 aaKnown RBP20.99■□□□□ 0.95
LINC01238-205ENST00000567549 LAG3P18627 525 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 NDUFV1P49821 464 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 DNM2P50570 870 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 CCT2P78371 535 aaKnown RBP20.99■□□□□ 0.95
LINC01238-205ENST00000567549 TBC1D8BQ0IIM8 1120 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 MOXD1Q6UVY6 613 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 KLHL23Q8NBE8 558 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 OSMRQ99650 979 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 JPH2Q9BR39 696 aaPredicted RBP20.99■□□□□ 0.95
LINC01238-205ENST00000567549 LRFN3Q9BTN0 628 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 TMX1Q9H3N1 280 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 ZSWIM6Q9HCJ5 1215 aa20.99■□□□□ 0.95
LINC01238-205ENST00000567549 PUF60Q9UHX1 559 aaKnown RBP20.99■□□□□ 0.95
LINC01238-205ENST00000567549 TBKBP1A7MCY6 615 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 ZBTB42B2RXF5 422 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 C9IYK1 514 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 DKC1O60832 514 aaKnown RBP eCLIP20.98■□□□□ 0.95
LINC01238-205ENST00000567549 ITGB1P05556 798 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 HYAL1Q12794 435 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 SMAD4Q13485 552 aaKnown RBP20.98■□□□□ 0.95
LINC01238-205ENST00000567549 EFCAB12Q6NXP0 572 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 TRMT1LQ7Z2T5 733 aaKnown RBP20.98■□□□□ 0.95
LINC01238-205ENST00000567549 MICAL1Q8TDZ2 1067 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 POF1BQ8WVV4 589 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 CDCA3Q99618 268 aaPredicted RBP20.98■□□□□ 0.95
LINC01238-205ENST00000567549 NAP1L4Q99733 375 aaKnown RBP20.98■□□□□ 0.95
LINC01238-205ENST00000567549 IGFLR1Q9H665 355 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 DACT1Q9NYF0 836 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 CD207Q9UJ71 328 aa20.98■□□□□ 0.95
LINC01238-205ENST00000567549 MYO7AQ13402 2215 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 PRR33A8MZF0 331 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 MSH4O15457 936 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 VTNP04004 478 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 ATP4AP20648 1035 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 IBSPP21815 317 aaPredicted RBP20.97■□□□□ 0.95
LINC01238-205ENST00000567549 EIF4BP23588 611 aaKnown RBP20.97■□□□□ 0.95
LINC01238-205ENST00000567549 PPM1AP35813 382 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 PRKCEQ02156 737 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 BMS1Q14692 1282 aaKnown RBP20.97■□□□□ 0.95
LINC01238-205ENST00000567549 SMAD2Q15796 467 aaKnown RBP20.97■□□□□ 0.95
LINC01238-205ENST00000567549 Q4G0T1 1027 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 MIER3Q7Z3K6 550 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 EXOC8Q8IYI6 725 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 THNSL1Q8IYQ7 743 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 BLIDQ8IZY5 108 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 EFHBQ8N7U6 833 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 SPPL3Q8TCT6 385 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 RASGRP4Q8TDF6 673 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 TBCKQ8TEA7 893 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 SLC5A5Q92911 643 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 INO80BQ9C086 356 aaPredicted RBP20.97■□□□□ 0.95
LINC01238-205ENST00000567549 WDR81Q562E7 1941 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 KIAA1671Q9BY89 1806 aa20.97■□□□□ 0.95
LINC01238-205ENST00000567549 DCXO43602 365 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 PLA2G5P39877 138 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 NLRP11P59045 1033 aaKnown RBP20.96■□□□□ 0.95
LINC01238-205ENST00000567549 ADAM15Q13444 863 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 NONOQ15233 471 aaKnown RBP eCLIP20.96■□□□□ 0.95
LINC01238-205ENST00000567549 KRT25Q7Z3Z0 450 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 FAM228AQ86W67 206 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 DAGLBQ8NCG7 672 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 TMEM40Q8WWA1 233 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 LENG9Q96B70 501 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 TMEM117Q9H0C3 514 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 NCOA5Q9HCD5 579 aaKnown RBP20.96■□□□□ 0.95
LINC01238-205ENST00000567549 TLR9Q9NR96 1032 aa20.96■□□□□ 0.95
LINC01238-205ENST00000567549 FNDC1Q4ZHG4 1894 aaPredicted RBP20.96■□□□□ 0.95
LINC01238-205ENST00000567549 CHMP2AO43633 222 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 GPR32O75388 356 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 CLCN3P51790 818 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 FAM189BP81408 668 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 KRT17Q04695 432 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 ZP2Q05996 745 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 XKR3Q5GH77 459 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 LRRC43Q8N309 656 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 UIMC1Q96RL1 719 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 LZTS1Q9Y250 596 aa20.95■□□□□ 0.94
LINC01238-205ENST00000567549 ATG2AQ2TAZ0 1938 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 CYP3A7-CYP3A51PA0A087WV96 503 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 MBTPS2O43462 519 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms