RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 RRAGAQ7L523 313 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 U2AF1L4Q8WU68 220 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 DEPDC1BQ8WUY9 529 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 TSC1Q92574 1164 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 CDHR1Q96JP9 859 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 POLR3CQ9BUI4 534 aaPredicted RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 KMT5AQ9NQR1 393 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 PPP2R3BQ9Y5P8 575 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 ARIH2O95376 493 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 ATF2P15336 505 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 CHRNA5P30532 468 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 PTK2Q05397 1052 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 DCAF4L1Q3SXM0 396 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 TBC1D10BQ4KMP7 808 aaPredicted RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 FBXW10Q5XX13 1052 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 PATL1Q86TB9 770 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 SCN4BQ8IWT1 228 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 TRIM42Q8IWZ5 723 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 OSBPL9Q96SU4 736 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.68□□□□□ -1.34
CDH13-209ENST00000567109 DRC3Q9H069 523 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 CHEK2O96017 543 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 ALDH1A1P00352 501 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 FDX1P10109 184 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 FGFR2P21802 821 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 TSPY1Q01534 308 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 POSTNQ15063 836 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 MEI1Q5TIA1 1274 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 SIRT2Q8IXJ6 389 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 NRBF2Q96F24 287 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 CBX8Q9HC52 389 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 TARSL2A2RTX5 802 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 GTPBP10A4D1E9 387 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 KBTBD13C9JR72 458 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 SART1O43290 800 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 MYL7Q01449 175 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 KIF19Q2TAC6 998 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 HABP4Q5JVS0 413 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 TTC19Q6DKK2 380 aaPredicted RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 PIP4K2CQ8TBX8 421 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 ANKRD7Q92527 254 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 FSD1LQ9BXM9 530 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 KIF17Q9P2E2 1029 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 KCNH3Q9ULD8 1083 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 PI4K2BG5E9Z4 385 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 SLC27A2O14975 620 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 ADORA1P30542 326 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 NFX1Q12986 1120 aaKnown RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 ANKRD42Q8N9B4 389 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 ZNF274Q96GC6 653 aaPredicted RBP6.68□□□□□ -1.34
CDH13-209ENST00000567109 SH3GL3Q99963 347 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 VPS54Q9P1Q0 977 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 DAGLAQ9Y4D2 1042 aa6.68□□□□□ -1.34
CDH13-209ENST00000567109 hCG_1642624A0A1W2PR95 340 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 RNF40O75150 1001 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 PRDM1O75626 825 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 DDX5P17844 614 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 PDE1BQ01064 536 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 ZC3H12BQ5HYM0 836 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 E4F1Q66K89 784 aaPredicted RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 TWF2Q6IBS0 349 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 PPHLN1Q8NEY8 458 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 BTN2A2Q8WVV5 523 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 CAPS2Q9BXY5 557 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 CUEDC2Q9H467 287 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 TLR7Q9NYK1 1049 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 ZNF148Q9UQR1 794 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 KIF20BQ96Q89 1820 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 E5RI56 91 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 SNX2O60749 519 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 CRKP46108 304 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 EPHB4P54760 987 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 VEPH1Q14D04 833 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 PHKG1Q16816 387 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 ARHGEF18Q6ZSZ5 1173 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 GPIHBP1Q8IV16 184 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 KSR1Q8IVT5 923 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 TAB3Q8N5C8 712 aaPredicted RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 DPF2Q92785 391 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 CENPKQ9BS16 269 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 MAP3K20Q9NYL2 800 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 WDR19Q8NEZ3 1342 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 USP17L12C9JPN9 530 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 USP17L21D6R901 530 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 MYO1CO00159 1063 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 AK2P54819 239 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 OSTNP61366 133 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 ART3Q13508 389 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 AOC3Q16853 763 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 ADAT2Q7Z6V5 191 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 TRPC7Q9HCX4 862 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 MRGBPQ9NV56 204 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 SENP1Q9P0U3 644 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 NRXN3Q9Y4C0 1643 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 EEF1B2P24534 225 aaKnown RBP6.67□□□□□ -1.34
CDH13-209ENST00000567109 PANX2Q96RD6 677 aa6.67□□□□□ -1.34
CDH13-209ENST00000567109 TLK1Q9UKI8 766 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms