RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HOXC8P31273 242 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 RTP1P59025 263 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 LRRC26Q2I0M4 334 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 ZNF484Q5JVG2 852 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 ADALQ6DHV7 355 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 GDF6Q6KF10 455 aaPredicted RBP12.8□□□□□ -0.36
KARS-207ENST00000566560 OTUD6AQ7L8S5 288 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 SLC43A3Q8NBI5 491 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 PIGOQ8TEQ8 1089 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 TRAPPC12Q8WVT3 735 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 CEP170P1Q96L14 293 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 NACC1Q96RE7 527 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 SH2D3AQ9BRG2 576 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 CYP26B1Q9NR63 512 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
KARS-207ENST00000566560 TUBE1Q9UJT0 475 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 NOD1Q9Y239 953 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
KARS-207ENST00000566560 EVPLQ92817 2033 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 A0A1W2PQ27 194 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 A0A1W2PQ64 194 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 A0A1W2PQD8 194 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 RRN3P2A6NIE6 340 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 ZBTB42B2RXF5 422 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 ZBTB39O15060 712 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 B4GALT4O60513 344 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 STAT6P42226 847 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 RARRES1P49788 294 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 TBC1D8BQ0IIM8 1120 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 HIC1Q14526 733 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 PTGISQ16647 500 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 XKR9Q5GH70 373 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 C1orf53Q5VUE5 145 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 RRAGBQ5VZM2 374 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 KCNK18Q7Z418 384 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 PDILTQ8N807 584 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
KARS-207ENST00000566560 NIFKQ9BYG3 293 aaKnown RBP12.79□□□□□ -0.36
KARS-207ENST00000566560 BHMT2Q9H2M3 363 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 ANKEF1Q9NU02 776 aa12.79□□□□□ -0.36
KARS-207ENST00000566560 DBR1Q9UK59 544 aaKnown RBP12.79□□□□□ -0.36
KARS-207ENST00000566560 A0A087WWV3 80 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 A0A087X0B3 334 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 ARHGEF35A5YM69 484 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 E9PMD0 336 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
KARS-207ENST00000566560 USO1O60763 962 aaKnown RBP12.78□□□□□ -0.36
KARS-207ENST00000566560 C22orf31O95567 290 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 EYA4O95677 639 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 SSBP05455 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
KARS-207ENST00000566560 PFKFB1P16118 471 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 CMA1P23946 247 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 CDK7P50613 346 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 POLGP54098 1239 aaPredicted RBP12.78□□□□□ -0.36
KARS-207ENST00000566560 NPEPPSP55786 919 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 ZNF200P98182 395 aaPredicted RBP12.78□□□□□ -0.36
KARS-207ENST00000566560 TARBP2Q15633 366 aaKnown RBP12.78□□□□□ -0.36
KARS-207ENST00000566560 ANKRD33Q7Z3H0 272 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 KCTD17Q8N5Z5 321 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 LRRC15Q8TF66 581 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 DNM3Q9UQ16 869 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 PPME1Q9Y570 386 aa12.78□□□□□ -0.36
KARS-207ENST00000566560 SIP14410 1827 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 MBLAC1A4D2B0 266 aaPredicted RBP12.77□□□□□ -0.37
KARS-207ENST00000566560 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 MAGEB2O15479 319 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 TREHO43280 583 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 CYP2C9P11712 490 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 XRCC6P12956 609 aaKnown RBP eCLIP12.77□□□□□ -0.37
KARS-207ENST00000566560 RFC5P40937 340 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 ADAM17P78536 824 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 TLE2Q04725 743 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 EMC2Q15006 297 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 MARCH8Q5T0T0 291 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 SLC7A3Q8WY07 619 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 LARP4BQ92615 738 aaKnown RBP12.77□□□□□ -0.37
KARS-207ENST00000566560 RAD54LQ92698 747 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 DHX58Q96C10 678 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.37
KARS-207ENST00000566560 TRPV6Q9H1D0 765 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 GOLPH3LQ9H4A5 285 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 BLOC1S4Q9NUP1 217 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 KCNH3Q9ULD8 1083 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 MYH11P35749 1972 aa12.77□□□□□ -0.37
KARS-207ENST00000566560 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
KARS-207ENST00000566560 DGAT1O75907 488 aa12.76□□□□□ -0.37
KARS-207ENST00000566560 CD4P01730 458 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms