RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
UBE3A-205ENST00000566215 ADAMTS10Q9H324 1103 aa7.04□□□□□ -1.28
UBE3A-205ENST00000566215 LY9Q9HBG7 655 aa7.04□□□□□ -1.28
UBE3A-205ENST00000566215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBE3A-205ENST00000566215 PPP4R2Q9NY27 417 aa7.04□□□□□ -1.28
UBE3A-205ENST00000566215 TDRD15B5MCY1 1934 aaKnown RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 IGKV6-21A0A0C4DH24 114 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 ZBTB42B2RXF5 422 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 SP9P0CG40 484 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 TECP42680 631 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 ERVFC1P60507 584 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 SETQ01105 290 aaPredicted RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 KRT76Q01546 638 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 ATAT1Q5SQI0 421 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 IFNLR1Q8IU57 520 aaPredicted RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 IL31RAQ8NI17 732 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 PANK1Q8TE04 598 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 SECISBP2LQ93073 1101 aaKnown RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 POMKQ9H5K3 350 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 WDR6Q9NNW5 1121 aaKnown RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 RXFP3Q9NSD7 469 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 DACT1Q9NYF0 836 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 BARX2Q9UMQ3 279 aaPredicted RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 KLRF2D3W0D1 207 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 SLC30A4O14863 429 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 HNRNPA1P09651 372 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 PDE4AP27815 886 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 CLCN4P51793 760 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 PDE1AP54750 535 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 ECHDC2Q86YB7 292 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 TBC1D5Q92609 795 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 CUL5Q93034 780 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 RMDN1Q96DB5 314 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 MXRA8Q9BRK3 442 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 PLEKHA4Q9H4M7 779 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.03□□□□□ -1.283e-9■□□□□ 10.5
UBE3A-205ENST00000566215 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
UBE3A-205ENST00000566215 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 TNRC6BQ9UPQ9 1833 aaKnown RBP7.03□□□□□ -1.28
UBE3A-205ENST00000566215 C22orf31O95567 290 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 CIITAP33076 1130 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 LIFRP42702 1097 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 IMMTQ16891 758 aaKnown RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 SLC35G1Q2M3R5 365 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 LRRC55Q6ZSA7 311 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 KDF1Q8NAX2 398 aaPredicted RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 SEC62Q99442 399 aaKnown RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 DNAH12Q6ZR08 3092 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 MEIS1O00470 390 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 GAS2O43903 313 aaKnown RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 RAD21O60216 631 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 GHRP10912 638 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 KIF5BP33176 963 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 SREBF1P36956 1147 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 NRLP54845 237 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 SNAP25P60880 206 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 SMC5Q8IY18 1101 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 EMILIN2Q9BXX0 1053 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 NIFKQ9BYG3 293 aaKnown RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 OSBPL7Q9BZF2 842 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 JPH1Q9HDC5 661 aaPredicted RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 ZSCAN32Q9NX65 697 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 SLC9A2Q9UBY0 812 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 CCDC163A0A0D9SF12 145 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 TGM1P22735 817 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 CD52P31358 61 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 LAIR1Q6GTX8 287 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 MTSS1LQ765P7 747 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 KIAA0319LQ8IZA0 1049 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 MAML2Q8IZL2 1156 aaPredicted RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 AGO4Q9HCK5 861 aaKnown RBP7.02□□□□□ -1.29
UBE3A-205ENST00000566215 TBC1D22BQ9NU19 505 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 ZSWIM5Q9P217 1185 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 HCFC2Q9Y5Z7 792 aa7.02□□□□□ -1.29
UBE3A-205ENST00000566215 CLUHO75153 1309 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 PMLP29590 882 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 AXLP30530 894 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.296e-11■■■■■ 42.3
UBE3A-205ENST00000566215 VPS53Q5VIR6 699 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 MOXD1Q6UVY6 613 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 CYFIP1Q7L576 1253 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 KIAA1958Q8N8K9 716 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 PJA1Q8NG27 643 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 TCF25Q9BQ70 676 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 NFKBIZQ9BYH8 718 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 RIC8AQ9NPQ8 531 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 A0A0D9SFI3 127 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 FAM221BA6H8Z2 402 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 SOBPA7XYQ1 873 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 CYTH3O43739 400 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 INSRRP14616 1297 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 SDSP20132 328 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 IRX6P78412 446 aaPredicted RBP7.01□□□□□ -1.29
UBE3A-205ENST00000566215 PFKPQ01813 784 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 HTR4Q13639 388 aa7.01□□□□□ -1.29
UBE3A-205ENST00000566215 TARBP2Q15633 366 aaKnown RBP7.01□□□□□ -1.29
UBE3A-205ENST00000566215 USH1GQ495M9 461 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms