RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 TMEM40Q8WWA1 233 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 SEPT1Q8WYJ6 367 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 GLG1Q92896 1179 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 ELAC1Q9H777 363 aaKnown RBP19.18■□□□□ 0.66
CLK3-217ENST00000566126 PARD6AQ9NPB6 346 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 DDX19BQ9UMR2 479 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 NEDD4P46934 1319 aa19.18■□□□□ 0.66
CLK3-217ENST00000566126 DOCK8Q8NF50 2099 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 TRIM6-TRIM34B2RNG4 842 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 ZBTB5O15062 677 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 LRRN2O75325 713 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 RPS6KA5O75582 802 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 ZNF528Q3MIS6 628 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 FAM43BQ6ZT52 329 aaPredicted RBP19.17■□□□□ 0.66
CLK3-217ENST00000566126 LRRC43Q8N309 656 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 SLC44A3Q8N4M1 653 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 GPR152Q8TDT2 470 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 AUTS2Q8WXX7 1259 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 BORCS6Q96GS4 357 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 SMARCAD1Q9H4L7 1026 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 USP18Q9UMW8 372 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 ST3GAL5Q9UNP4 418 aa19.17■□□□□ 0.66
CLK3-217ENST00000566126 BAZ2BQ9UIF8 2168 aaKnown RBP19.16■□□□□ 0.66
CLK3-217ENST00000566126 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.16■□□□□ 0.66
CLK3-217ENST00000566126 PCP11498 1178 aaKnown RBP19.16■□□□□ 0.66
CLK3-217ENST00000566126 SRFP11831 508 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 KCNA2P16389 499 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 LETM2Q2VYF4 491 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 CABP7Q86V35 215 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 ESR2Q92731 530 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 PCYT2Q99447 389 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 FOXQ1Q9C009 403 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 ZBP1Q9H171 429 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 SFXN1Q9H9B4 322 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 SMG5Q9UPR3 1016 aaKnown RBP19.16■□□□□ 0.66
CLK3-217ENST00000566126 CEP295Q9C0D2 2601 aa19.16■□□□□ 0.66
CLK3-217ENST00000566126 SETXQ7Z333 2677 aaKnown RBP19.15■□□□□ 0.66
CLK3-217ENST00000566126 SMIM35A0A1B0GVV1 85 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 NME8Q8N427 588 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 GIMAP8Q8ND71 665 aaPredicted RBP19.15■□□□□ 0.66
CLK3-217ENST00000566126 PJA1Q8NG27 643 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 EPC1Q9H2F5 836 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 ARHGEF3Q9NR81 526 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 GINS2Q9Y248 185 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 IRAK3Q9Y616 596 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 LAMA4Q16363 1823 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 ZMYM6O95789 1325 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 TTC41PQ6P2S7 1318 aa19.15■□□□□ 0.66
CLK3-217ENST00000566126 DSC3Q14574 896 aa19.14■□□□□ 0.65
CLK3-217ENST00000566126 PLCB4Q15147 1175 aa19.14■□□□□ 0.65
CLK3-217ENST00000566126 SLC35G1Q2M3R5 365 aa19.14■□□□□ 0.65
CLK3-217ENST00000566126 ENAHQ8N8S7 591 aaPredicted RBP19.14■□□□□ 0.65
CLK3-217ENST00000566126 SECISBP2LQ93073 1101 aaKnown RBP19.14■□□□□ 0.65
CLK3-217ENST00000566126 FBXO4Q9UKT5 387 aa19.14■□□□□ 0.65
CLK3-217ENST00000566126 PCDHGA2Q9Y5H1 932 aa19.14■□□□□ 0.65
CLK3-217ENST00000566126 EVPLQ92817 2033 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 CNOT1A5YKK6 2376 aaKnown RBP19.13■□□□□ 0.65
CLK3-217ENST00000566126 NT5C1B-RDH14C9J2C7 533 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 SLC30A4O14863 429 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 DMWDQ09019 674 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 NONOQ15233 471 aaKnown RBP eCLIP19.13■□□□□ 0.655e-7■■□□□ 13.6
CLK3-217ENST00000566126 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 VPS52Q8N1B4 723 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 ZBTB44Q8NCP5 570 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 COL4A3Q01955 1670 aa19.13■□□□□ 0.65
CLK3-217ENST00000566126 KLRF2D3W0D1 207 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 GPR182O15218 404 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 HOXA2O43364 376 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 LILRB5O75023 590 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 METAP2P50579 478 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLK3-217ENST00000566126 MTHFD1LQ6UB35 978 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 NLRX1Q86UT6 975 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 FAM228AQ86W67 206 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 TMEM173Q86WV6 379 aaPredicted RBP19.12■□□□□ 0.65
CLK3-217ENST00000566126 IQCA1Q86XH1 822 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 OTUD7AQ8TE49 926 aaPredicted RBP19.12■□□□□ 0.65
CLK3-217ENST00000566126 ATRIPQ8WXE1 791 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 ZSCAN10Q96SZ4 725 aaPredicted RBP19.12■□□□□ 0.65
CLK3-217ENST00000566126 HELLSQ9NRZ9 838 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 EPS15L1Q9UBC2 864 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 ANGPTL2Q9UKU9 493 aa19.12■□□□□ 0.65
CLK3-217ENST00000566126 CTSAP10619 480 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 BMS1Q14692 1282 aaKnown RBP19.11■□□□□ 0.65
CLK3-217ENST00000566126 PTPN14Q15678 1187 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 CCDC178Q5BJE1 867 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 CLLU1OSQ5K130 101 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 ODR4Q5SWX8 454 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 DCLRE1AQ6PJP8 1040 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 C15orf39Q6ZRI6 1047 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 PIGSQ96S52 555 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 RNF41Q9H4P4 317 aaPredicted RBP19.11■□□□□ 0.65
CLK3-217ENST00000566126 SPATA6Q9NWH7 488 aaPredicted RBP19.11■□□□□ 0.65
CLK3-217ENST00000566126 MAD2L2Q9UI95 211 aa19.11■□□□□ 0.65
CLK3-217ENST00000566126 A0A0D9SFI3 127 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 LAMTOR5O43504 91 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 GBP2P32456 591 aaPredicted RBP19.1■□□□□ 0.65
CLK3-217ENST00000566126 BCAR1P56945 870 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 STARD6P59095 220 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms