RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 USP38Q8NB14 1042 aa23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 ZNF396Q96N95 335 aaPredicted RBP23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 DBR1Q9UK59 544 aaKnown RBP23.52■■□□□ 1.36
SHCBP1-205ENST00000566016 SLC26A4O43511 780 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 BAIAP3O94812 1187 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 BRD1O95696 1058 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 RARRES1P49788 294 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 LRIT3Q3SXY7 679 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 PLEKHG4Q58EX7 1191 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 XKR9Q5GH70 373 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 ATL3Q6DD88 541 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 CNKSR3Q6P9H4 555 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 LRRC71Q8N4P6 559 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 RNPC3Q96LT9 517 aaKnown RBP23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 SH2D3AQ9BRG2 576 aa23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 CELF4Q9BZC1 486 aaKnown RBP23.51■■□□□ 1.35
SHCBP1-205ENST00000566016 ZBTB39O15060 712 aa23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 LONP1P36776 959 aaKnown RBP23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 DNM2P50570 870 aa23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 POLGP54098 1239 aaPredicted RBP23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 CDC42EP1Q00587 391 aa23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 SLC39A14Q15043 492 aa23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 HYIQ5T013 277 aa23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 FAM43BQ6ZT52 329 aaPredicted RBP23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 MMTAG2Q9BU76 263 aaKnown RBP23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 SUGCTQ9HAC7 445 aa23.5■■□□□ 1.35
SHCBP1-205ENST00000566016 PP2D1A8MPX8 630 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 DGAT1O75907 488 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 MKRN4PQ13434 485 aaPredicted RBP23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 HABP4Q5JVS0 413 aaKnown RBP23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 FBXO47Q5MNV8 452 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 TSHZ1Q6ZSZ6 1077 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 ZNF579Q8NAF0 562 aaKnown RBP23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 PIGOQ8TEQ8 1089 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 CCDC43Q96MW1 224 aaKnown RBP23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 AKT3Q9Y243 479 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 EFCAB14O75071 495 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 YEATS4O95619 227 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 TMEM62Q0P6H9 643 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 LPIN1Q14693 890 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 ECM1Q16610 540 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 OTOP2Q7RTS6 562 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 APBB2Q92870 758 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 IFIH1Q9BYX4 1025 aaKnown RBP23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 SRPRBQ9Y5M8 271 aaKnown RBP23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 TCHHQ07283 1943 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 PTPRSQ13332 1948 aa23.49■■□□□ 1.35
SHCBP1-205ENST00000566016 ABHD14A-ACY1A0A1B0GW23 586 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 GPR32O75388 356 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 VTNP04004 478 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 CDC25AP30304 524 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 CRYBB1P53674 252 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 EMC2Q15006 297 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 FOXD4L5Q5VV16 416 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 LINC00301Q8NCQ3 95 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 FOXD4L4Q8WXT5 416 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 SEPT8Q92599 483 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 NT5C3AQ9H0P0 336 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 FBXO2Q9UK22 296 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 KIAA1024Q9UPX6 916 aa23.48■■□□□ 1.35
SHCBP1-205ENST00000566016 GHRP10912 638 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 CEBPZQ03701 1054 aaKnown RBP23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 DRP2Q13474 957 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 DBF4BQ8NFT6 615 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 TCP11Q8WWU5 503 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 MTRQ99707 1265 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 ATP6V0A4Q9HBG4 840 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 DDX19AQ9NUU7 478 aaKnown RBP23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 ZDHHC9Q9Y397 364 aa23.47■■□□□ 1.35
SHCBP1-205ENST00000566016 DDIT3P35638 169 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 GPC3P51654 580 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 IKBKEQ14164 716 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 KIZQ2M2Z5 673 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 PSPC1Q8WXF1 523 aaKnown RBP23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 OSBPL7Q9BZF2 842 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 ADAMTS10Q9H324 1103 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 XPNPEP1Q9NQW7 623 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 CXXC1Q9P0U4 656 aaPredicted RBP23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 SUCLA2Q9P2R7 463 aaPredicted RBP23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 GBF1Q92538 1859 aa23.46■■□□□ 1.35
SHCBP1-205ENST00000566016 MARCKSP29966 332 aaPredicted RBP23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 UBA7P41226 1012 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 NLRP11P59045 1033 aaKnown RBP23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 GRIN1Q05586 938 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 STK38Q15208 465 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 ZNF410Q86VK4 478 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 KRI1Q8N9T8 703 aaKnown RBP23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 CFAP45Q9UL16 551 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 DNM3Q9UQ16 869 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 ATP6V1DQ9Y5K8 247 aa23.45■■□□□ 1.34
SHCBP1-205ENST00000566016 ARHGEF35A5YM69 484 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 PPP6R2O75170 966 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 ANP32AP39687 249 aaKnown RBP23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 ODR4Q5SWX8 454 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 CABP7Q86V35 215 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 MCPH1Q8NEM0 835 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 TMEM40Q8WWA1 233 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 CCSER1Q9C0I3 900 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 BHMT2Q9H2M3 363 aa23.44■■□□□ 1.34
SHCBP1-205ENST00000566016 AGO3Q9H9G7 860 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms