RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 C1orf186Q6ZWK4 172 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 RPAINQ86UA6 219 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 SERINC5Q86VE9 423 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 LINC01465Q8N7H1 131 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 IQUBQ8NA54 791 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 PPP1R13LQ8WUF5 828 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 MRPS27Q92552 414 aaKnown RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 RAD54LQ92698 747 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 CDK5RAP3Q96JB5 506 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 TRPV6Q9H1D0 765 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 BHMT2Q9H2M3 363 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 CUEDC2Q9H467 287 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 TSPY26PQ9H489 355 aa14.05□□□□□ -0.16
SF3B3-206ENST00000565990 SEPT9Q9UHD8 586 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-206ENST00000565990 MKI67P46013 3256 aaKnown RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 POLR2DO15514 142 aaKnown RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 B4GALT4O60513 344 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 DGAT1O75907 488 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 PLA2G4BP0C869 781 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 CYP11B2P19099 503 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 NDUFA8P51970 172 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 ATN1P54259 1190 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 TLE2Q04725 743 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 FAAP100Q0VG06 881 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 PTK7Q13308 1070 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 ZRSR1Q15695 479 aaKnown RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 PTGISQ16647 500 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 TRIM60Q495X7 471 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 MTERF2Q49AM1 385 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 RINT1Q6NUQ1 792 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 FMR1NBQ8N0W7 255 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 NME8Q8N427 588 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 TRAPPC12Q8WVT3 735 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 SH2D3AQ9BRG2 576 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 GOLPH3LQ9H4A5 285 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 TRMT13Q9NUP7 481 aaKnown RBP14.04□□□□□ -0.16
SF3B3-206ENST00000565990 KBTBD4Q9NVX7 518 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 KCND2Q9NZV8 630 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 USP25Q9UHP3 1055 aa14.04□□□□□ -0.16
SF3B3-206ENST00000565990 SMIM35A0A1B0GVV1 85 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 SLFN14P0C7P3 912 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 SYKP43405 635 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 TBC1D8BQ0IIM8 1120 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 LONRF3Q496Y0 759 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 ARSHQ5FYA8 562 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 FAM47CQ5HY64 1035 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 EFCAB12Q6NXP0 572 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 TAF2Q6P1X5 1199 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 KIAA0319LQ8IZA0 1049 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 PDILTQ8N807 584 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 JPH2Q9BR39 696 aaPredicted RBP14.03□□□□□ -0.16
SF3B3-206ENST00000565990 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 XPNPEP1Q9NQW7 623 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 TUBE1Q9UJT0 475 aa14.03□□□□□ -0.16
SF3B3-206ENST00000565990 MYH11P35749 1972 aa14.02□□□□□ -0.16
SF3B3-206ENST00000565990 DCDC2CA8MYV0 355 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 TLR3O15455 904 aaKnown RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 GAS2O43903 313 aaKnown RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 ZNF202O95125 648 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 RPLP2P05387 115 aaKnown RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 CYP2C9P11712 490 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 ARL2P36404 184 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 STAT6P42226 847 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 RTP1P59025 263 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 IGBP1P78318 339 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 FAM160A1Q05DH4 1040 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 RBL2Q08999 1139 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 MCM6Q14566 821 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 TRIM71Q2Q1W2 868 aaKnown RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 IER5Q5VY09 327 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 CNNM4Q6P4Q7 775 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 RUFY4Q6ZNE9 571 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 SV2BQ7L1I2 683 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 ELOA2Q8IYF1 753 aaPredicted RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 ZNF710Q8N1W2 664 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 RETREG2Q8NC44 543 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 SLC7A3Q8WY07 619 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 LARP4BQ92615 738 aaKnown RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 DHX38Q92620 1227 aaKnown RBP14.02□□□□□ -0.17
SF3B3-206ENST00000565990 ZBTB10Q96DT7 871 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 TIGD1Q96MW7 591 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 MTRQ99707 1265 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 TIPINQ9BVW5 301 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 MAGEF1Q9HAY2 307 aa14.02□□□□□ -0.17
SF3B3-206ENST00000565990 ARHGEF35A5YM69 484 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 ASAP2O43150 1006 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 ACTN4O43707 911 aaKnown RBP14.01□□□□□ -0.17
SF3B3-206ENST00000565990 PQBP1O60828 265 aaKnown RBP14.01□□□□□ -0.17
SF3B3-206ENST00000565990 OFD1O75665 1012 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 FAM26DQ5JW98 314 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 MCPH1Q8NEM0 835 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms