RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 TRPV2Q9Y5S1 764 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 ABHD14A-ACY1A0A1B0GW23 586 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 CHRNA1P02708 482 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 TXLNAP40222 546 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 RARRES1P49788 294 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 NPEPPSP55786 919 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 MGAT3Q09327 533 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 MXD4Q14582 209 aaPredicted RBP14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 TRAF7Q6Q0C0 670 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 DEFB128Q7Z7B8 93 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 LINC01465Q8N7H1 131 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 KRI1Q8N9T8 703 aaKnown RBP14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 LINC00301Q8NCQ3 95 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 MCPH1Q8NEM0 835 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 KCNG4Q8TDN1 519 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 USP28Q96RU2 1077 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 CCSER1Q9C0I3 900 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 KCNG1Q9UIX4 513 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 AKT3Q9Y243 479 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 CDY2AQ9Y6F7 541 aa14.03□□□□□ -0.16
SHCBP1-204ENST00000565887 LTBP2Q14767 1821 aa14.02□□□□□ -0.16
SHCBP1-204ENST00000565887 ARHGEF35A5YM69 484 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 GPR182O15218 404 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 SPTLC2O15270 562 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 NBNO60934 754 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 POU5F1BQ06416 359 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 SHHQ15465 462 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 LRIT3Q3SXY7 679 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 PLEKHG4Q58EX7 1191 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 FAM173BQ6P4H8 233 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 TSHZ1Q6ZSZ6 1077 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 C16orf59Q7L2K0 433 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 CABP7Q86V35 215 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 ZNF410Q86VK4 478 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 PHOSPHO2Q8TCD6 241 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 PIGOQ8TEQ8 1089 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 PSPC1Q8WXF1 523 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 RNPC3Q96LT9 517 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 MTRQ99707 1265 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.175e-6■■■□□ 16.3
SHCBP1-204ENST00000565887 FTHL17Q9BXU8 183 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 ATP6V0A4Q9HBG4 840 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 DDX19AQ9NUU7 478 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 SUCLA2Q9P2R7 463 aaPredicted RBP14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 TFIP11Q9UBB9 837 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 CCDC39Q9UFE4 941 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 EVPLQ92817 2033 aa14.02□□□□□ -0.17
SHCBP1-204ENST00000565887 EYA4O95677 639 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 CTSHP09668 335 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 ACRP10323 421 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 CLCN3P51790 818 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 EPHB4P54760 987 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 NLRP11P59045 1033 aaKnown RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 CEBPZQ03701 1054 aaKnown RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 PCBP1Q15365 356 aaKnown RBP eCLIP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 FBXO47Q5MNV8 452 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 FOXD4L5Q5VV16 416 aaPredicted RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 FOXD4L4Q8WXT5 416 aaPredicted RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 MMTAG2Q9BU76 263 aaKnown RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 TIPINQ9BVW5 301 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 IFIH1Q9BYX4 1025 aaKnown RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 GCOM2Q9BZD3 368 aaPredicted RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 KCND2Q9NZV8 630 aa14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 FBXO2Q9UK22 296 aaPredicted RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 CIZ1Q9ULV3 898 aaPredicted RBP14.01□□□□□ -0.17
SHCBP1-204ENST00000565887 HSFX4A0A1B0GTS1 333 aaPredicted RBP14□□□□□ -0.17
SHCBP1-204ENST00000565887 HSFX3A0A1B0GWH4 333 aaPredicted RBP14□□□□□ -0.17
SHCBP1-204ENST00000565887 TMEM150BA6NC51 233 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 ZBTB39O15060 712 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 CUTAO60888 179 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 GPR32O75388 356 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 CYP11B2P19099 503 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 EIF4BP23588 611 aaKnown RBP14□□□□□ -0.17
SHCBP1-204ENST00000565887 MARCKSP29966 332 aaPredicted RBP14□□□□□ -0.17
SHCBP1-204ENST00000565887 KRT85P78386 507 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 PKP1Q13835 747 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 TFDP1Q14186 410 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 MBTPS1Q14703 1052 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 GPNMBQ14956 572 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 EMC2Q15006 297 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 RASIP1Q5U651 963 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 PADI6Q6TGC4 694 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 OTOP2Q7RTS6 562 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 LRRC71Q8N4P6 559 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 DBF4BQ8NFT6 615 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 PRPF31Q8WWY3 499 aaKnown RBP14□□□□□ -0.17
SHCBP1-204ENST00000565887 CSRNP2Q9H175 543 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 ADAMTS10Q9H324 1103 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 RCOR1Q9UKL0 485 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 SLC4A7Q9Y6M7 1214 aa14□□□□□ -0.17
SHCBP1-204ENST00000565887 RPS6KA5O75582 802 aa13.99□□□□□ -0.17
SHCBP1-204ENST00000565887 VTNP04004 478 aa13.99□□□□□ -0.17
SHCBP1-204ENST00000565887 CDC25AP30304 524 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms