RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 IGHA2P01877 340 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 CYP2C19P33261 490 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 DUSP28Q4G0W2 176 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 ADSSL1Q8N142 457 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 AOPEPQ8N6M6 819 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 SPATA33Q96N06 139 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 REEP2Q9BRK0 252 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 AZI2Q9H6S1 392 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 PRKAG2Q9UGJ0 569 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 PPME1Q9Y570 386 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 COL4A3BPQ9Y5P4 624 aa21.15■□□□□ 0.98
CSPG4P13-201ENST00000565545 SORBS3O60504 671 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 STBD1O95210 358 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 KIF20AO95235 890 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 TCF7P36402 384 aaPredicted RBP21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 SLC26A2P50443 739 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 STAT5BP51692 787 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 PRKCEQ02156 737 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 ARHGAP1Q07960 439 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 XKR9Q5GH70 373 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 FAM26FQ5R3K3 315 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 PLPPR4Q7Z2D5 763 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 FAM167AQ96KS9 214 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 NRBP2Q9NSY0 501 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 SEL1LQ9UBV2 794 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 ZHX1Q9UKY1 873 aaPredicted RBP21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 GDAQ9Y2T3 454 aa21.14■□□□□ 0.97
CSPG4P13-201ENST00000565545 ARID2Q68CP9 1835 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 EMSYQ7Z589 1322 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 NPHP3-ACAD11A0A0J9YXS1 232 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 PSMA7O14818 248 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 ZNF862O60290 1169 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 CD44P16070 742 aaKnown RBP21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 ADCYAP1R1P41586 468 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 PRCPP42785 496 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 STK4Q13043 487 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 PAK1Q13153 545 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 HERC4Q5GLZ8 1057 aaPredicted RBP21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 ANO5Q75V66 913 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 SMYD4Q8IYR2 804 aaPredicted RBP21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 GUF1Q8N442 669 aaKnown RBP21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 NIFKQ9BYG3 293 aaKnown RBP21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 RWDD2AQ9UIY3 292 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 TELO2Q9Y4R8 837 aa21.13■□□□□ 0.97
CSPG4P13-201ENST00000565545 MYH11P35749 1972 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 DNM1LO00429 736 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 FAM13AO94988 1023 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 OATP04181 439 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 ZNF131P52739 623 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 NCAPHQ15003 741 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 CCDC144BQ3MJ40 725 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 HSDL1Q3SXM5 330 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 ARRDC4Q8NCT1 418 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 PPTC7Q8NI37 304 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 COPS5Q92905 334 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 PCYT2Q99447 389 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 SMARCAD1Q9H4L7 1026 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 OLFML3Q9NRN5 406 aa21.12■□□□□ 0.97
CSPG4P13-201ENST00000565545 BICDL2A1A5D9 508 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 DGAT1O75907 488 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 ZNF865P0CJ78 1059 aaPredicted RBP21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 SMPD1P17405 629 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 TNFAIP2Q03169 654 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 SPATA1Q5VX52 437 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 FOXR2Q6PJQ5 311 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 KIAA0895Q8NCT3 520 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 NELFBQ8WX92 580 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 CEP170P1Q96L14 293 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 PARVGQ9HBI0 331 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 SLC39A2Q9NP94 309 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 CYP26B1Q9NR63 512 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 SEPT9Q9UHD8 586 aaPredicted RBP21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 PCDHA2Q9Y5H9 948 aa21.11■□□□□ 0.97
CSPG4P13-201ENST00000565545 SYNRGQ9UMZ2 1314 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 PPFIA4O75335 1185 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 ATP4AP20648 1035 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 CCNE1P24864 410 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 DEKP35659 375 aaKnown RBP21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 RTP1P59025 263 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 RAD51AP2Q09MP3 1159 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 GJC2Q5T442 439 aaPredicted RBP21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 UTP14CQ5TAP6 766 aaKnown RBP21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 KLHL10Q6JEL2 608 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 EXOC8Q8IYI6 725 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 MCPH1Q8NEM0 835 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 TRPV1Q8NER1 839 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 BBXQ8WY36 941 aaPredicted RBP21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 GLG1Q92896 1179 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 DRC1Q96MC2 740 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 ZHX3Q9H4I2 956 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 CTNND2Q9UQB3 1225 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 ATP11BQ9Y2G3 1177 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 Q9Y3F1 56 aa21.1■□□□□ 0.97
CSPG4P13-201ENST00000565545 COL6A3P12111 3177 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 MAPTP10636 758 aaKnown RBP21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 PLA2G4FQ68DD2 849 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 SARM1Q6SZW1 724 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 STXBP4Q6ZWJ1 553 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms