RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 BANK1Q8NDB2 785 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 ADAMTS10Q9H324 1103 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 RGS18Q9NS28 235 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 NRBP2Q9NSY0 501 aa17.67■□□□□ 0.42
CDH3-204ENST00000565453 MRPL42Q9Y6G3 142 aaKnown RBP17.67■□□□□ 0.42
CDH3-204ENST00000565453 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 C9IYK1 514 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 GRM6O15303 877 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 SLC37A4O43826 429 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 FDPSP14324 419 aaKnown RBP17.66■□□□□ 0.42
CDH3-204ENST00000565453 GATMP50440 423 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 DSC3Q14574 896 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 COL19A1Q14993 1142 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 TCEAL5Q5H9L2 206 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 ODR4Q5SWX8 454 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 EFCAB12Q6NXP0 572 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 MIER3Q7Z3K6 550 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 LRRC71Q8N4P6 559 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 OXER1Q8TDS5 423 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 CEP89Q96ST8 783 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 C11orf84Q9BUA3 381 aaPredicted RBP17.66■□□□□ 0.42
CDH3-204ENST00000565453 LMAN2LQ9H0V9 348 aa17.66■□□□□ 0.42
CDH3-204ENST00000565453 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
CDH3-204ENST00000565453 GPR182O15218 404 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 LARGE1O95461 756 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 NLRP11P59045 1033 aaKnown RBP17.65■□□□□ 0.42
CDH3-204ENST00000565453 ME3Q16798 604 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 LEXMQ3ZCV2 418 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 ADAM2Q99965 735 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 PLVAPQ9BX97 442 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 NIFKQ9BYG3 293 aaKnown RBP17.65■□□□□ 0.42
CDH3-204ENST00000565453 NSUN3Q9H649 340 aaKnown RBP17.65■□□□□ 0.42
CDH3-204ENST00000565453 KCNMB3Q9NPA1 279 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 C1orf112Q9NSG2 853 aa17.65■□□□□ 0.42
CDH3-204ENST00000565453 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
CDH3-204ENST00000565453 XIRP2A4UGR9 3374 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 CCDC194A0A1B0GVG4 234 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 FAM189BP81408 668 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 LETM2Q2VYF4 491 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
CDH3-204ENST00000565453 EARS2Q5JPH6 523 aaKnown RBP17.64■□□□□ 0.41
CDH3-204ENST00000565453 PPP4R3AQ6IN85 833 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 SLC24A5Q71RS6 500 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 NEK8Q86SG6 692 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
CDH3-204ENST00000565453 P2RX5Q93086 422 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 MAP7D2Q96T17 732 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 VAV3Q9UKW4 847 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 LRFN2Q9ULH4 789 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 AKT3Q9Y243 479 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 BRWD1Q9NSI6 2320 aa17.64■□□□□ 0.41
CDH3-204ENST00000565453 IGKV6-21A0A0C4DH24 114 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 TMEM150BA6NC51 233 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 EML1O00423 815 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 SEC24BO95487 1268 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 MMP1P03956 469 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 XBP1P17861 261 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 KCNA5P22460 613 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 TMOD1P28289 359 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 GPC3P51654 580 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 PPP2R5CQ13362 524 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 CAMK1Q14012 370 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 XKR3Q5GH77 459 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 ZNF710Q8N1W2 664 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 NEK9Q8TD19 979 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 TNFRSF25Q93038 417 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 GTF3C6Q969F1 213 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 PLAGL2Q9UPG8 496 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 PCDHB7Q9Y5E2 793 aa17.63■□□□□ 0.41
CDH3-204ENST00000565453 GCFC2P16383 781 aaKnown RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 TBC1D8BQ0IIM8 1120 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 DRP2Q13474 957 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 NAALADL2Q58DX5 795 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 PIK3AP1Q6ZUJ8 805 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 NSUN7Q8NE18 718 aaKnown RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 WASF1Q92558 559 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 HAS1Q92839 578 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 PABPC5Q96DU9 382 aaKnown RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 FAM20AQ96MK3 541 aa17.62■□□□□ 0.41
CDH3-204ENST00000565453 ELAC1Q9H777 363 aaKnown RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 ALG13Q9NP73 1137 aaKnown RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 SEPT9Q9UHD8 586 aaPredicted RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 FNDC1Q4ZHG4 1894 aaPredicted RBP17.62■□□□□ 0.41
CDH3-204ENST00000565453 MUC3AQ02505 3323 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 ITGB1P05556 798 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 DARSP14868 501 aaKnown RBP17.61■□□□□ 0.41
CDH3-204ENST00000565453 DNAJB1P25685 340 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 ST3GAL1Q11201 340 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 FAM102BQ5T8I3 360 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 ANO5Q75V66 913 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 SPPL3Q8TCT6 385 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 ZNF668Q96K58 619 aaPredicted RBP17.61■□□□□ 0.41
CDH3-204ENST00000565453 RNF19AQ9NV58 838 aa17.61■□□□□ 0.41
CDH3-204ENST00000565453 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms