RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MGEA5O60502 916 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 SRFP11831 508 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 EPCAMP16422 314 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 SEMA3FQ13275 785 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 LETM2Q2VYF4 491 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 DCLRE1AQ6PJP8 1040 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 LRRC55Q6ZSA7 311 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 SLC22A17Q8WUG5 538 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 CDHR1Q96JP9 859 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 CASD1Q96PB1 797 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 ZKSCAN3Q9BRR0 538 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 BCO2Q9BYV7 579 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 SFXN1Q9H9B4 322 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 ANGPTL2Q9UKU9 493 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 GINS2Q9Y248 185 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 TELO2Q9Y4R8 837 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 KIAA1217Q5T5P2 1943 aa10.41□□□□□ -0.74
VPS9D1-205ENST00000565452 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 KLRF2D3W0D1 207 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 SLC30A4O14863 429 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 GBP2P32456 591 aaPredicted RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 CSTF1Q05048 431 aaKnown RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 C15orf39Q6ZRI6 1047 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 MAML2Q8IZL2 1156 aaPredicted RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 SLC39A11Q8N1S5 342 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 LRRC43Q8N309 656 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 NETO1Q8TDF5 533 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 RSAD2Q8WXG1 361 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 DDX1Q92499 740 aaKnown RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 STAMQ92783 540 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 ZBTB10Q96DT7 871 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 AZI2Q9H6S1 392 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 ARHGEF3Q9NR81 526 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 HELLSQ9NRZ9 838 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 SPATA6Q9NWH7 488 aaPredicted RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 ZSCAN32Q9NX65 697 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 GMEB2Q9UKD1 530 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 NOC2LQ9Y3T9 749 aaKnown RBP10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 IRAK3Q9Y616 596 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.74
VPS9D1-205ENST00000565452 USP24Q9UPU5 2620 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 TTC41PQ6P2S7 1318 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 CARNS1A5YM72 827 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 ZSCAN20P17040 1043 aaPredicted RBP10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 TGM1P22735 817 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 PBX3P40426 434 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 HAND2P61296 217 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 PTPN14Q15678 1187 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 VPS52Q8N1B4 723 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 PJA1Q8NG27 643 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 GPR152Q8TDT2 470 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 MTMR8Q96EF0 704 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 TMEM169Q96HH4 297 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 EPC1Q9H2F5 836 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 RAB23Q9ULC3 237 aa10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 SMG5Q9UPR3 1016 aaKnown RBP10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
VPS9D1-205ENST00000565452 POTEMA6NI47 508 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 PPP1R11O60927 126 aaPredicted RBP10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 CTSAP10619 480 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 GLULP15104 373 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 KLRC2P26717 231 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 STARD6P59095 220 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 PCNX4Q63HM2 1172 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 MTHFD1LQ6UB35 978 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 CYP26C1Q6V0L0 522 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 ZBTB44Q8NCP5 570 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 EMILIN2Q9BXX0 1053 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 CDHR5Q9HBB8 845 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 EPS15L1Q9UBC2 864 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 DPP7Q9UHL4 492 aa10.38□□□□□ -0.75
VPS9D1-205ENST00000565452 ZNF213O14771 459 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 MAFGO15525 162 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 ATP9AO75110 1047 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 KLRC1P26715 233 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 MAGEA9P43362 315 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 METAP2P50579 478 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 CRYBB1P53674 252 aaPredicted RBP10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 BCAR1P56945 870 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 PLCB4Q15147 1175 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 MCMDC2Q4G0Z9 681 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 ELMSAN1Q6PJG2 1045 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 PLPPR4Q7Z2D5 763 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 DDX53Q86TM3 631 aaKnown RBP10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 STAG2Q8N3U4 1231 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 CUL5Q93034 780 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 WDR6Q9NNW5 1121 aaKnown RBP10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 SLC2A4RGQ9NR83 387 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.37□□□□□ -0.758e-11■■■■■ 37.2
VPS9D1-205ENST00000565452 MYH7P12883 1935 aa10.37□□□□□ -0.75
VPS9D1-205ENST00000565452 FRMPD4Q14CM0 1322 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 PNMA6FA0A0J9YX94 578 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms