RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 CERS4Q9HA82 394 aa13.79□□□□□ -0.2
SPG7-211ENST00000565370 PADI3Q9ULW8 664 aa13.79□□□□□ -0.2
SPG7-211ENST00000565370 NOL7Q9UMY1 257 aaKnown RBP13.79□□□□□ -0.2
SPG7-211ENST00000565370 PPME1Q9Y570 386 aa13.79□□□□□ -0.2
SPG7-211ENST00000565370 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
SPG7-211ENST00000565370 DENND3A2RUS2 1198 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 LINC01553A4QN01 128 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
SPG7-211ENST00000565370 STAG3L1P0CL83 205 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
SPG7-211ENST00000565370 EPHA7Q15375 998 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 NPAS4Q8IUM7 802 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 MICALL1Q8N3F8 863 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 LRRC71Q8N4P6 559 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
SPG7-211ENST00000565370 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 HAS1Q92839 578 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 CCDC43Q96MW1 224 aaKnown RBP13.78□□□□□ -0.2
SPG7-211ENST00000565370 PPP1R16BQ96T49 567 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
SPG7-211ENST00000565370 TSPYL2Q9H2G4 693 aaPredicted RBP13.78□□□□□ -0.2
SPG7-211ENST00000565370 SUGCTQ9HAC7 445 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 C1orf112Q9NSG2 853 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 RWDD3Q9Y3V2 267 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 ARID2Q68CP9 1835 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 NLRC5Q86WI3 1866 aa13.78□□□□□ -0.2
SPG7-211ENST00000565370 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 EML1O00423 815 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 ARHGEF15O94989 841 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 POLGP54098 1239 aaPredicted RBP13.77□□□□□ -0.21
SPG7-211ENST00000565370 ERVK-21P61565 698 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 CDC42EP1Q00587 391 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 ADGRE1Q14246 886 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 OTUD6AQ7L8S5 288 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 NOSTRINQ8IVI9 506 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 FIBCD1Q8N539 461 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 LINC01465Q8N7H1 131 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 ZSWIM4Q9H7M6 989 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.21
SPG7-211ENST00000565370 ENPP3O14638 875 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 GAS2O43903 313 aaKnown RBP13.76□□□□□ -0.21
SPG7-211ENST00000565370 ATP2B1P20020 1258 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 MCM7P33993 719 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 RFC5P40937 340 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 TRAPPC10P48553 1259 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 GPC3P51654 580 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
SPG7-211ENST00000565370 CYP4A11Q02928 519 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 TARBP2Q15633 366 aaKnown RBP13.76□□□□□ -0.21
SPG7-211ENST00000565370 TMEM266Q2M3C6 531 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 PLA2G4FQ68DD2 849 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 TMEM40Q8WWA1 233 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 LINC01599Q8WXQ3 324 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 PPM1EQ8WY54 764 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 CEP170P1Q96L14 293 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 TTC12Q9H892 705 aaPredicted RBP13.76□□□□□ -0.21
SPG7-211ENST00000565370 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 NOC2LQ9Y3T9 749 aaKnown RBP13.76□□□□□ -0.21
SPG7-211ENST00000565370 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
SPG7-211ENST00000565370 TTC3P53804 2025 aa13.76□□□□□ -0.21
SPG7-211ENST00000565370 EPOPA6NHQ4 379 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 H3BQV1 296 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 GPR32O75388 356 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 SFPQP23246 707 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPG7-211ENST00000565370 YWHABP31946 246 aaKnown RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 TXKP42681 527 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 SARSP49591 514 aaKnown RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 SPIRE1Q08AE8 756 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 GRB10Q13322 594 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 ANO5Q75V66 913 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 ZNF410Q86VK4 478 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 CMTR2Q8IYT2 770 aaKnown RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 DYDC2Q96IM9 177 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 GCOM2Q9BZD3 368 aaPredicted RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 INO80BQ9C086 356 aaPredicted RBP13.75□□□□□ -0.21
SPG7-211ENST00000565370 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 ST3GAL5Q9UNP4 418 aa13.75□□□□□ -0.21
SPG7-211ENST00000565370 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 IGKV6-21A0A0C4DH24 114 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 TMEM150BA6NC51 233 aa13.74□□□□□ -0.21
SPG7-211ENST00000565370 MAFO75444 373 aaPredicted RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
SPG7-211ENST00000565370 EIF4BP23588 611 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms