RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LILRA6Q6PI73 481 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 ZNF662Q6ZS27 426 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 LARP4Q71RC2 724 aaKnown RBP eCLIP5.97□□□□□ -1.45
PALB2-203ENST00000565038 C11orf74Q86VG3 221 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 NME9Q86XW9 330 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 REXO1L1PQ8IX06 675 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 ZZZ3Q8IYH5 903 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 IFNL2Q8IZJ0 200 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 MYL10Q9BUA6 226 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 SEMA4AQ9H3S1 761 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 Q9UFV3 132 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 FBXO10Q9UK96 956 aa5.97□□□□□ -1.45
PALB2-203ENST00000565038 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.97□□□□□ -1.45
PALB2-203ENST00000565038 ARID1BQ8NFD5 2236 aaPredicted RBP5.97□□□□□ -1.45
PALB2-203ENST00000565038 BPIP17213 487 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 CD40P25942 277 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 UNQ6494/PRO21346Q6UXR6 183 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 FILIP1Q7Z7B0 1213 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 PHYKPLQ8IUZ5 450 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 ZNF496Q96IT1 587 aaPredicted RBP5.96□□□□□ -1.46
PALB2-203ENST00000565038 TTC1Q99614 292 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 PTPN18Q99952 460 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 KIAA1683Q9H0B3 1180 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 RAPGEFL1Q9UHV5 662 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 MSRAQ9UJ68 235 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 ZNF536O15090 1300 aa5.96□□□□□ -1.46
PALB2-203ENST00000565038 PRPF6O94906 941 aaKnown RBP5.95□□□□□ -1.46
PALB2-203ENST00000565038 LSP1P33241 339 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 ANTXR2P58335 489 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 PPP2CBP62714 309 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 PPP2CAP67775 309 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 ADCY2Q08462 1091 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 LRRC32Q14392 662 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 EIF4HQ15056 248 aaKnown RBP5.95□□□□□ -1.46
PALB2-203ENST00000565038 TERF2Q15554 542 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 DDB1Q16531 1140 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 TBC1D10BQ4KMP7 808 aaPredicted RBP5.95□□□□□ -1.46
PALB2-203ENST00000565038 BROXQ5VW32 411 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 TMEM200BQ69YZ2 307 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 TIGD7Q6NT04 549 aaPredicted RBP5.95□□□□□ -1.46
PALB2-203ENST00000565038 ARHGEF18Q6ZSZ5 1173 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 KRT26Q7Z3Y9 468 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 BCL6BQ8N143 479 aaPredicted RBP5.95□□□□□ -1.46
PALB2-203ENST00000565038 AFAP1L2Q8N4X5 818 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 RELTQ969Z4 430 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 BDH2Q9BUT1 245 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 FAM126AQ9BYI3 521 aaPredicted RBP5.95□□□□□ -1.46
PALB2-203ENST00000565038 IFT22Q9H7X7 185 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 JADE2Q9NQC1 790 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 PRKAB1Q9Y478 270 aa5.95□□□□□ -1.46
PALB2-203ENST00000565038 ELL2O00472 640 aaPredicted RBP5.94□□□□□ -1.46
PALB2-203ENST00000565038 LAMTOR5O43504 91 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 FOXD2O60548 495 aaPredicted RBP5.94□□□□□ -1.46
PALB2-203ENST00000565038 VIL1P09327 827 aaKnown RBP5.94□□□□□ -1.46
PALB2-203ENST00000565038 NFKB2Q00653 900 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 PCOLCEQ15113 449 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 PLEKHH3Q7Z736 793 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 RTKN2Q8IZC4 609 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 ZNF610Q8N9Z0 462 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 OR5AN1Q8NGI8 311 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 SLC5A5Q92911 643 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
PALB2-203ENST00000565038 ZEB2O60315 1214 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 RAB11FIP3O75154 756 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 CNOT4O95628 575 aaKnown RBP5.93□□□□□ -1.46
PALB2-203ENST00000565038 PLATP00750 562 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 MRE11P49959 708 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 MEOX1P50221 254 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 PHC1P78364 1004 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 TRIM68Q6AZZ1 485 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 LHFPL2Q6ZUX7 228 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 KANSL1Q7Z3B3 1105 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 LIMS2Q7Z4I7 341 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 HDGFL2Q7Z4V5 671 aaPredicted RBP5.93□□□□□ -1.46
PALB2-203ENST00000565038 RPGRQ92834 1020 aaKnown RBP5.93□□□□□ -1.46
PALB2-203ENST00000565038 MTG2Q9H4K7 406 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 SPC25Q9HBM1 224 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 FAM184BQ9ULE4 1060 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 SLC4A7Q9Y6M7 1214 aa5.93□□□□□ -1.46
PALB2-203ENST00000565038 DNAJC6O75061 913 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 BCAR1P56945 870 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 ADAM15Q13444 863 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 STAT4Q14765 748 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 SURF1Q15526 300 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 TBR1Q16650 682 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 DGKDQ16760 1214 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 RNF151Q2KHN1 245 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 ZMAT1Q5H9K5 638 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 ZBTB41Q5SVQ8 909 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 GPR158Q5T848 1215 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 FRMD7Q6ZUT3 714 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 ESPNLQ6ZVH7 1005 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 CXorf38Q8TB03 319 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 LRRC37BQ96QE4 947 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 ANO3Q9BYT9 981 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 KCMF1Q9P0J7 381 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms