RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 XRCC6P12956 609 aaKnown RBP eCLIP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 CYP11B2P19099 503 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 SARSP49591 514 aaKnown RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 RARRES1P49788 294 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 STAT5BP51692 787 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 STX1AQ16623 288 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 NT5DC1Q5TFE4 455 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 OTUD6AQ7L8S5 288 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 DYMQ7RTS9 669 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 TRMT1LQ7Z2T5 733 aaKnown RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 TLK2Q86UE8 772 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 DDX12PQ92771 950 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 GLG1Q92896 1179 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 CCDC47Q96A33 483 aaKnown RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 GSDMAQ96QA5 445 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
SF3B3-205ENST00000564899 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
SF3B3-205ENST00000564899 TMEM150BA6NC51 233 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 GRXCR1A8MXD5 290 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 KBTBD13C9JR72 458 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 TNFRSF10AO00220 468 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 SEPT4O43236 478 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 MMP3P08254 477 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 DNAJB2P25686 324 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 PBX2P40425 430 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 NLRP12P59046 1061 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 PLA2G4FQ68DD2 849 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 CNNM4Q6P4Q7 775 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 PLPPR4Q7Z2D5 763 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 TRIM50Q86XT4 487 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 PPM1EQ8WY54 764 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 FAM167AQ96KS9 214 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 AP5M1Q9H0R1 490 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 SMARCAD1Q9H4L7 1026 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 EXOC1Q9NV70 894 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 ANO10Q9NW15 660 aa12.31□□□□□ -0.44
SF3B3-205ENST00000564899 DOCK5Q9H7D0 1870 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 TRANK1O15050 2925 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 NPHP3-ACAD11A0A0J9YXS1 232 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 PVALEFA0A1B0GWK0 134 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 KLRC4O43908 158 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
SF3B3-205ENST00000564899 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
SF3B3-205ENST00000564899 STBD1O95210 358 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 PGK1P00558 417 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 LGALS2P05162 132 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-205ENST00000564899 IDEP14735 1019 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 ATP4AP20648 1035 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 MARK3P27448 753 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 SLC26A2P50443 739 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-205ENST00000564899 RAD51AP2Q09MP3 1159 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 MORC3Q14149 939 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 KCNB1Q14721 858 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 DGKDQ16760 1214 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 BRDTQ58F21 947 aaPredicted RBP12.3□□□□□ -0.44
SF3B3-205ENST00000564899 ARSHQ5FYA8 562 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 C1orf186Q6ZWK4 172 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 UNC13DQ70J99 1090 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 ANO5Q75V66 913 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 ARRDC4Q8NCT1 418 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 DNAJC19Q96DA6 116 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 CEP170P1Q96L14 293 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 SH2D3AQ9BRG2 576 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 Q9Y3F1 56 aa12.3□□□□□ -0.44
SF3B3-205ENST00000564899 A6NJR5 290 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 USO1O60763 962 aaKnown RBP12.29□□□□□ -0.44
SF3B3-205ENST00000564899 PQBP1O60828 265 aaKnown RBP12.29□□□□□ -0.44
SF3B3-205ENST00000564899 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 ZNF286BP0CG31 522 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 RARBP10826 455 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 GUCY2CP25092 1073 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 CPT1AP50416 773 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 NPEPPSP55786 919 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 CACNB1Q02641 598 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-205ENST00000564899 GIT2Q14161 759 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 ADGRE1Q14246 886 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 PLCB4Q15147 1175 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 MTERF2Q49AM1 385 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms