RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RRP9O43818 475 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 CYP3A4P08684 503 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 SFPQP23246 707 aaKnown RBP eCLIP3.65□□□□□ -1.834e-6■■■□□ 18.1
CHD9-213ENST00000564845 GJC1P36383 396 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 CYP2J2P51589 502 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 NLRP12P59046 1061 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 GNG11P61952 73 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 PEX6Q13608 980 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 BSNDQ8WZ55 320 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 MRRFQ96E11 262 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 TTLL13PA6NNM8 815 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 SMAPO00193 183 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 NAA20P61599 178 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 MTMR3Q13615 1198 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 TDRD12Q587J7 1177 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 CNGA4Q8IV77 575 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 RRP36Q96EU6 259 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 IQCGQ9H095 443 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 MYO1AQ9UBC5 1043 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 DDX25Q9UHL0 483 aaKnown RBP3.65□□□□□ -1.83
CHD9-213ENST00000564845 PCDHA4Q9UN74 947 aa3.65□□□□□ -1.83
CHD9-213ENST00000564845 MYH8P13535 1937 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 ZFHX3Q15911 3703 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 BACH1O14867 736 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KPNA2P52292 529 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 ASPHQ12797 758 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 DRP2Q13474 957 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 MAPK6Q16659 721 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 PDXDC1Q6P996 788 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KCNV1Q6PIU1 500 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SGMS1Q86VZ5 419 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 MMTAG2Q9BU76 263 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 FHDC1Q9C0D6 1143 aaPredicted RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 C6orf50Q9HD87 102 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TOPORSQ9NS56 1045 aaPredicted RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 DNAJC17Q9NVM6 304 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 DNAAF2Q9NVR5 837 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 RNF14Q9UBS8 474 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SYNRGQ9UMZ2 1314 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 MYMKA6NI61 221 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SART1O43290 800 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 HIRAP54198 1017 aaPredicted RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 ERVK-24P63145 666 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KIF5AQ12840 1032 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 BFSP1Q12934 665 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 ABCB5Q2M3G0 1257 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TREML2Q5T2D2 321 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TNFRSF25Q93038 417 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TMEM87BQ96K49 555 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 BHMT2Q9H2M3 363 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 HACL1Q9UJ83 578 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 INTUQ9ULD6 942 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SUGT1Q9Y2Z0 365 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 ATP6V0A2Q9Y487 856 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SLX4Q8IY92 1834 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 M0R2N6 131 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SNUPNO95149 360 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 MOCS3O95396 460 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 YEATS4O95619 227 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 FTCDO95954 541 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TRIM49P0CI25 452 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TRIM49CP0CI26 452 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 PAFAH1B1P43034 410 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 C2orf54Q08AI8 447 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 CALCRLQ16602 461 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SGSM1Q2NKQ1 1148 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 HP1BP3Q5SSJ5 553 aaPredicted RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 SEPT14Q6ZU15 432 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 RRAGAQ7L523 313 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 MICALL2Q8IY33 904 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KIAA0895Q8NCT3 520 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 CALCOCO1Q9P1Z2 691 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 CLEC11AQ9Y240 323 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 PPP1R3GB7ZBB8 358 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KIAA0391O15091 583 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 KDM1AO60341 852 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 CYP2C8P10632 490 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 PFKFB3Q16875 520 aaPredicted RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 DCAF15Q66K64 600 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KRT39Q6A163 491 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 PDZD4Q76G19 769 aaPredicted RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 OTUD5Q96G74 571 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 TAAR1Q96RJ0 339 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 KMT5AQ9NQR1 393 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 POLR3EQ9NVU0 708 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 PPME1Q9Y570 386 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 ZHX2Q9Y6X8 837 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 CSMD1Q96PZ7 3565 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 SYNDIG1LA6NDD5 238 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 CLEC4GQ6UXB4 293 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 WRNIP1Q96S55 665 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 COL14A1Q05707 1796 aaKnown RBP3.64□□□□□ -1.83
CHD9-213ENST00000564845 STK36Q9NRP7 1315 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 FLOT1O75955 427 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 ZFYVE27Q5T4F4 411 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 DTX3LQ8TDB6 740 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 HDAC7Q8WUI4 952 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 COPS5Q92905 334 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 AK8Q96MA6 479 aa3.64□□□□□ -1.83
CHD9-213ENST00000564845 RUSC1Q9BVN2 902 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms