RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CTC1Q2NKJ3 1217 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 LRCH2Q5VUJ6 765 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 EFCAB12Q6NXP0 572 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 FAM178BQ8IXR5 827 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 TBCKQ8TEA7 893 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 MBOAT7Q96N66 472 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 ADAM2Q99965 735 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 NIFKQ9BYG3 293 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 CDHR5Q9HBB8 845 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 PRKAG3Q9UGI9 489 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 PCDHB12Q9Y5F1 795 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 MRPL42Q9Y6G3 142 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 NLRC5Q86WI3 1866 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 PI4K2BG5E9Z4 385 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 HOXA2O43364 376 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 PSMD10O75832 226 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 COL9A1P20849 921 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 EIF4BP23588 611 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 ANAPC15P60006 121 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 ANKRD1Q15327 319 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 LINC01465Q8N7H1 131 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 UIMC1Q96RL1 719 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 NAP1L4Q99733 375 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 ADAMTS10Q9H324 1103 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 TMEM161AQ9NX61 479 aa13.74□□□□□ -0.21
GTF3C1-204ENST00000564664 LOXHD1Q8IVV2 1947 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 RBAK-RBAKDNI3L0D1 243 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 ZNF862O60290 1169 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 NLRP11P59045 1033 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 DSC3Q14574 896 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 XKR3Q5GH77 459 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 FAM228AQ86W67 206 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 EXOC8Q8IYI6 725 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 GJD3Q8N144 294 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 KLHL23Q8NBE8 558 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 FAM20AQ96MK3 541 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 OSMRQ99650 979 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 JPH2Q9BR39 696 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 UNC45AQ9H3U1 944 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 CLDND1Q9NY35 253 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 AKT3Q9Y243 479 aa13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
GTF3C1-204ENST00000564664 MGEA5O60502 916 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 GPR37L1O60883 481 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 PPFIA3O75145 1194 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 VTNP04004 478 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 ITGB1P05556 798 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 ALADP13716 330 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 DNM2P50570 870 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 PRKCEQ02156 737 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 TBC1D8BQ0IIM8 1120 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 HYAL1Q12794 435 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 B3GNT9Q6UX72 402 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 TRMT1LQ7Z2T5 733 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 MIER3Q7Z3K6 550 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 WASF1Q92558 559 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 ALG13Q9NP73 1137 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 PPME1Q9Y570 386 aa13.72□□□□□ -0.21
GTF3C1-204ENST00000564664 STK36Q9NRP7 1315 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 CCDC194A0A1B0GVG4 234 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 CARNS1A5YM72 827 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 H3BQ06 376 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 CHMP2AO43633 222 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 PFKFB2O60825 505 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 EOMESO95936 686 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 LTBRP36941 435 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 GPC3P51654 580 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 CLCN3P51790 818 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 PSMC5P62195 406 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 STK3Q13188 491 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 ADAM15Q13444 863 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 CAMK1Q14012 370 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 NPY5RQ15761 445 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 TMEM31Q5JXX7 168 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 POF1BQ8WVV4 589 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 PHF20Q9BVI0 1012 aa13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 GCOM2Q9BZD3 368 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-204ENST00000564664 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms