RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 COG7P83436 770 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 PTK2Q05397 1052 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 SPATA21Q7Z572 469 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 METTL13Q8N6R0 699 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 TLR10Q9BXR5 811 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 TMBIM4Q9HC24 238 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 ESRRAP11474 423 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 PRLRP16471 622 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 GALCP54803 685 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 GTF2IP78347 998 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 EN1Q05925 392 aaPredicted RBP13.58□□□□□ -0.24
COMMD4-209ENST00000564068 BFSP1Q12934 665 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 CRYMQ14894 314 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 PIGOQ8TEQ8 1089 aa13.58□□□□□ -0.24
COMMD4-209ENST00000564068 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 A0A1W2PQJ5 194 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 NR3C1P04150 777 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 IRX1P78414 480 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-209ENST00000564068 LRRC23Q53EV4 343 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-209ENST00000564068 AGBL2Q5U5Z8 902 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 FBXL16Q8N461 479 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.57□□□□□ -0.24
COMMD4-209ENST00000564068 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 C7orf25Q9BPX7 421 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 LRRC10BA6NIK2 292 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L5A8MUK1 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L15C9J2P7 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L13C9JLJ4 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L11C9JVI0 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L18D6R9N7 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L22D6RA61 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L17D6RBQ6 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L19D6RCP7 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L20D6RJB6 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 SPAG7O75391 227 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 CDC25CP30307 473 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 SERPINB6P35237 376 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 RWDD2BP57060 319 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 AMPD2Q01433 879 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L24Q0WX57 530 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 USP17L6PQ6QN14 398 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-209ENST00000564068 C1orf54Q8WWF1 131 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 STAMBPL1Q96FJ0 436 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 GYG2O15488 501 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 MYBL1P10243 752 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 UCHL3P15374 230 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 RPUSD2Q8IZ73 545 aaKnown RBP13.57□□□□□ -0.24
COMMD4-209ENST00000564068 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 ZBTB10Q96DT7 871 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 TSNARE1Q96NA8 513 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 DIP2AQ14689 1571 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 NEURL4Q96JN8 1562 aa13.57□□□□□ -0.24
COMMD4-209ENST00000564068 MAP3K7O43318 606 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CAND2O75155 1236 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 FTLP02792 175 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CD19P15391 556 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 KCNJ1P48048 391 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CNPY4Q8N129 248 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 RSAD2Q8WXG1 361 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 GGA1Q9UJY5 639 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 SYNGAP1Q96PV0 1343 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 PSMC4P43686 418 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CDK8P49336 464 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 USP11P51784 963 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 SATB1Q01826 763 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 ERFEQ4G0M1 354 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 KLHDC7AQ5VTJ3 777 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 FUKQ8N0W3 1084 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 BBOF1Q8ND07 529 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 SREK1Q8WXA9 508 aaKnown RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 STOML1Q9UBI4 398 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 TTC7AQ9ULT0 858 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CNTNAP5Q8WYK1 1306 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 FAM237AA0A1B0GTK4 181 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 TRIM49P0CI25 452 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 TRIM49CP0CI26 452 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 SPARCL1Q14515 664 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 CPXCR1Q8N123 301 aa13.56□□□□□ -0.24
COMMD4-209ENST00000564068 HIPK4Q8NE63 616 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms