RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 CTGFP29279 349 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 SOX5P35711 763 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 GRIA2P42262 883 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 FLT3LGP49771 235 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 ZNF445P59923 1031 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 U2AF1Q01081 240 aaKnown RBP eCLIP6.96□□□□□ -1.3
TCF4-220ENST00000563824 AMPD3Q01432 767 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 AIMP1Q12904 312 aaKnown RBP6.96□□□□□ -1.3
TCF4-220ENST00000563824 MBTPS1Q14703 1052 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 CFAP100Q494V2 611 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 TM4SF20Q53R12 229 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 FIBCD1Q8N539 461 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 COA7Q96BR5 231 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 VWCEQ96DN2 955 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 RCC1LQ96I51 464 aaKnown RBP6.96□□□□□ -1.3
TCF4-220ENST00000563824 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
TCF4-220ENST00000563824 MXD3Q9BW11 206 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 ANKRD2Q9GZV1 360 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.96□□□□□ -1.3
TCF4-220ENST00000563824 PRDM5Q9NQX1 630 aaPredicted RBP6.96□□□□□ -1.3
TCF4-220ENST00000563824 CPA4Q9UI42 421 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 OGDHLQ9ULD0 1010 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 KCNH3Q9ULD8 1083 aa6.96□□□□□ -1.3
TCF4-220ENST00000563824 PROCP04070 461 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 APPP05067 770 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 PCCAP05165 728 aaPredicted RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 SNRPB2P08579 225 aaKnown RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 SNW1Q13573 536 aaKnown RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 SFRP5Q5T4F7 317 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 ZNF513Q8N8E2 541 aaPredicted RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 SYTL5Q8TDW5 730 aaPredicted RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 KCTD13Q8WZ19 329 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 PRMT6Q96LA8 375 aaPredicted RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 TEPSINQ96N21 525 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 P2RX7Q99572 595 aaKnown RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 PNNQ9H307 717 aaKnown RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 NDOR1Q9UHB4 597 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 MINPP1Q9UNW1 487 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 SLC45A1Q9Y2W3 748 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 SF3B6Q9Y3B4 125 aaKnown RBP6.95□□□□□ -1.3
TCF4-220ENST00000563824 MUC3AQ02505 3323 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 BDP1A6H8Y1 2624 aa6.95□□□□□ -1.3
TCF4-220ENST00000563824 DLG5Q8TDM6 1919 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 DDX60LQ5H9U9 1706 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 ARAP2Q8WZ64 1704 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 DNAJC25-GNG10A0A024R161 153 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 CLRN2A0PK11 232 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 MEIS1O00470 390 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 TNPO2O14787 897 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 CBX7O95931 251 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 HMGCRP04035 888 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 HOXB7P09629 217 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 FAM87AP0C7U9 286 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 STAT3P40763 770 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 MRPS5P82675 430 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 AMPD2Q01433 879 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 GRB10Q13322 594 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 PROSER3Q2NL68 480 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 CC2D1BQ5T0F9 858 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 CWF19L1Q69YN2 538 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 GTF2IRD2BQ6EKJ0 949 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 BEND4Q6ZU67 534 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 C15orf52Q6ZUT6 534 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 FASTKD5Q7L8L6 764 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 GTF2IRD2Q86UP8 949 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 TXNRD3Q86VQ6 643 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 THNSL2Q86YJ6 484 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 FAM20CQ8IXL6 584 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 CCDC191Q8NCU4 936 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 MYLIPQ8WY64 445 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 ASB2Q96Q27 587 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 PCGF6Q9BYE7 350 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 CAAP1Q9H8G2 361 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 METTL14Q9HCE5 456 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 CD209Q9NNX6 404 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 PRR13Q9NZ81 148 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 DBF4Q9UBU7 674 aaPredicted RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 TSPYL4Q9UJ04 414 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 GABRQQ9UN88 632 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 DIS3Q9Y2L1 958 aaKnown RBP6.94□□□□□ -1.3
TCF4-220ENST00000563824 CLSPNQ9HAW4 1339 aa6.94□□□□□ -1.3
TCF4-220ENST00000563824 PRUNE2Q8WUY3 3088 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 CXCL11O14625 94 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
TCF4-220ENST00000563824 LRRN2O75325 713 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 EOMESO95936 686 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 COL6A1P12109 1028 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 COL8A1P27658 744 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 RBM5P52756 815 aaKnown RBP eCLIP6.93□□□□□ -1.3
TCF4-220ENST00000563824 CLEC16AQ2KHT3 1053 aa6.93□□□□□ -1.3
TCF4-220ENST00000563824 AKNAD1Q5T1N1 836 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms