RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZBTB5O15062 677 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-203ENST00000563623 CAND2O75155 1236 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 TRIM49P0CI25 452 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 TRIM49CP0CI26 452 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
ABCA3-203ENST00000563623 SCP2P22307 547 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 HOXA13P31271 388 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-203ENST00000563623 GBP2P32456 591 aaPredicted RBP12.83□□□□□ -0.36
ABCA3-203ENST00000563623 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 SLC35G2Q8TBE7 412 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
ABCA3-203ENST00000563623 SCFD2Q8WU76 684 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
ABCA3-203ENST00000563623 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 SERPINB13Q9UIV8 391 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 NR2E1Q9Y466 385 aa12.83□□□□□ -0.36
ABCA3-203ENST00000563623 EVI5O60447 810 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 MMEP08473 750 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 PDE6BP35913 854 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 CATSPER3Q86XQ3 398 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 ACTRT1Q8TDG2 376 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 AZI2Q9H6S1 392 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 SAMD15Q9P1V8 674 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 DNAJC12Q9UKB3 198 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 GPR75-ASB3A0A0A6YYF3 556 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 hCG_1984214I3L0E3 225 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 DDX3XO00571 662 aaKnown RBP eCLIP12.82□□□□□ -0.361e-12■■■■■ 56.7
ABCA3-203ENST00000563623 NMT1P30419 496 aaKnown RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 CACNB3P54284 484 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 CTTNQ14247 550 aaKnown RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 DRAP1Q14919 205 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 ZNF713Q8N859 430 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 CCDC197Q8NCU1 140 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 N4BP2L2Q92802 583 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 KCTD10Q9H3F6 313 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 SWAP70Q9UH65 585 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 AJAP1Q9UKB5 411 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 FERP16591 822 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 SMTNP53814 917 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 UBXN2AP68543 259 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 ZC2HC1CQ53FD0 456 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 ZNF746Q6NUN9 644 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 TMC3Q7Z5M5 1100 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 ACTR5Q9H9F9 607 aaPredicted RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 MLXIPLQ9NP71 852 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 INTS9Q9NV88 658 aaKnown RBP12.82□□□□□ -0.36
ABCA3-203ENST00000563623 RASAL2Q9UJF2 1139 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
ABCA3-203ENST00000563623 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 ARAP2Q8WZ64 1704 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 OPLAHO14841 1288 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 CHN1P15882 459 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 MESDQ14696 234 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 TBC1D10BQ4KMP7 808 aaPredicted RBP12.81□□□□□ -0.36
ABCA3-203ENST00000563623 AADACL2Q6P093 401 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 HS2ST1Q7LGA3 356 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 FRMD5Q7Z6J6 570 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 TBC1D1Q86TI0 1168 aaPredicted RBP12.81□□□□□ -0.36
ABCA3-203ENST00000563623 METTL14Q9HCE5 456 aaKnown RBP12.81□□□□□ -0.36
ABCA3-203ENST00000563623 KCNK9Q9NPC2 374 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 DNAJC17Q9NVM6 304 aaKnown RBP12.81□□□□□ -0.36
ABCA3-203ENST00000563623 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 DNM1LO00429 736 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 EDIL3O43854 480 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 SHBGP04278 402 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 ARHGAP4P98171 946 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 ADCY1Q08828 1119 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 GIT2Q14161 759 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 EDRF1Q3B7T1 1238 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 ARSHQ5FYA8 562 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 CCDC105Q8IYK2 499 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 CEP120Q8N960 986 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 ANKRD42Q8N9B4 389 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 ZKSCAN4Q969J2 545 aaPredicted RBP12.81□□□□□ -0.36
ABCA3-203ENST00000563623 OSBPL7Q9BZF2 842 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 SLITRK6Q9H5Y7 841 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 DAGLAQ9Y4D2 1042 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 F8VZ95 297 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 RPS6KA4O75676 772 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 SPRED3Q2MJR0 410 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 CHMP6Q96FZ7 201 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
ABCA3-203ENST00000563623 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
ABCA3-203ENST00000563623 EXOC3O60645 756 aa12.8□□□□□ -0.36
ABCA3-203ENST00000563623 NEDD9Q14511 834 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms