RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ERVFC1P60507 584 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 SWSAP1Q6NVH7 229 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 DHX32Q7L7V1 743 aaKnown RBP21.21■□□□□ 0.99
NME3-204ENST00000563498 FAM228AQ86W67 206 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 VN1R2Q8NFZ6 395 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 ATP6V0A4Q9HBG4 840 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 TBC1D22BQ9NU19 505 aa21.21■□□□□ 0.99
NME3-204ENST00000563498 MAFBQ9Y5Q3 323 aaPredicted RBP21.21■□□□□ 0.99
NME3-204ENST00000563498 GPR32O75388 356 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 SRGAP2BP0DMP2 458 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 PLCB3Q01970 1234 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 KCNC3Q14003 757 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 DSC3Q14574 896 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 KIZQ2M2Z5 673 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 MCTP2Q6DN12 878 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 ZNF746Q6NUN9 644 aaPredicted RBP21.2■□□□□ 0.98
NME3-204ENST00000563498 SMAP1Q8IYB5 467 aaPredicted RBP21.2■□□□□ 0.98
NME3-204ENST00000563498 RASGRP4Q8TDF6 673 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 OSMRQ99650 979 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 CWH43Q9H720 699 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 CEP131Q9UPN4 1083 aa21.2■□□□□ 0.98
NME3-204ENST00000563498 ESYT2A0FGR8 921 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 GOLGA8AA7E2F4 631 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 GOLGA8BA8MQT2 603 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 HOXA2O43364 376 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 PTPN5P54829 565 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 SETQ01105 290 aaPredicted RBP21.19■□□□□ 0.98
NME3-204ENST00000563498 TSGA10IPQ3SY00 556 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 SUGP1Q8IWZ8 645 aaKnown RBP21.19■□□□□ 0.98
NME3-204ENST00000563498 CKAP2LQ8IYA6 745 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 ZNF710Q8N1W2 664 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 PRSS33Q8NF86 280 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 RPGRIP1Q96KN7 1286 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 ZNF577Q9BSK1 485 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 TMEM117Q9H0C3 514 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 FAM217BQ9NTX9 383 aaPredicted RBP21.19■□□□□ 0.98
NME3-204ENST00000563498 HCSTQ9UBK5 93 aa21.19■□□□□ 0.98
NME3-204ENST00000563498 MAGEB2O15479 319 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 FGFR1P11362 822 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 RBM10P98175 930 aaKnown RBP21.18■□□□□ 0.98
NME3-204ENST00000563498 SIGLEC14Q08ET2 396 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 PFKFB3Q16875 520 aaPredicted RBP21.18■□□□□ 0.98
NME3-204ENST00000563498 JAKMIP3Q5VZ66 844 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 FBXL6Q8N531 539 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 METTL13Q8N6R0 699 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 MRPS27Q92552 414 aaKnown RBP21.18■□□□□ 0.98
NME3-204ENST00000563498 PUF60Q9UHX1 559 aaKnown RBP21.18■□□□□ 0.98
NME3-204ENST00000563498 PCDHA10Q9Y5I2 948 aa21.18■□□□□ 0.98
NME3-204ENST00000563498 EVPLQ92817 2033 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 KLF18A0A0U1RQI7 1052 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 VTNP04004 478 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 PSAPP07602 524 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 TCEANC2Q96MN5 208 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 PPP1R16BQ96T49 567 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 ZMYND12Q9H0C1 365 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 S1PR5Q9H228 398 aa21.17■□□□□ 0.98
NME3-204ENST00000563498 NGRNQ9NPE2 291 aaKnown RBP21.17■□□□□ 0.98
NME3-204ENST00000563498 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 HOXB8P17481 243 aaPredicted RBP21.16■□□□□ 0.98
NME3-204ENST00000563498 CDC27P30260 824 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 PPM1AP35813 382 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 KRT32Q14532 448 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 IER5LQ5T953 404 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 ANKRD54Q6NXT1 300 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 LRRC43Q8N309 656 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 CCDC12Q8WUD4 166 aaPredicted RBP21.16■□□□□ 0.98
NME3-204ENST00000563498 FAM167AQ96KS9 214 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 CASD1Q96PB1 797 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 TCF25Q9BQ70 676 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 TCEAL9Q9UHQ7 104 aa21.16■□□□□ 0.98
NME3-204ENST00000563498 HMGB1P09429 215 aaKnown RBP21.15■□□□□ 0.98
NME3-204ENST00000563498 PTPN21Q16825 1174 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 ADCK5Q3MIX3 580 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 BMP2KLQ5H9B9 411 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 PLPP4Q5VZY2 271 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 KCNT2Q6UVM3 1135 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 LRRC55Q6ZSA7 311 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 REXO1Q8N1G1 1221 aaKnown RBP21.15■□□□□ 0.98
NME3-204ENST00000563498 LINC01465Q8N7H1 131 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 MAP7D2Q96T17 732 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 C6orf50Q9HD87 102 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 ENTPD7Q9NQZ7 604 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 RNF19AQ9NV58 838 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 GABBR1Q9UBS5 961 aa21.15■□□□□ 0.98
NME3-204ENST00000563498 MYH9P35579 1960 aaKnown RBP21.15■□□□□ 0.98
NME3-204ENST00000563498 KMT2EQ8IZD2 1858 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 ZSCAN20P17040 1043 aaPredicted RBP21.14■□□□□ 0.97
NME3-204ENST00000563498 EIF4BP23588 611 aaKnown RBP21.14■□□□□ 0.97
NME3-204ENST00000563498 TMOD1P28289 359 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 CIITAP33076 1130 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 TECP42680 631 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 CLCN3P51790 818 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 NLRP11P59045 1033 aaKnown RBP21.14■□□□□ 0.97
NME3-204ENST00000563498 IRX6P78412 446 aaPredicted RBP21.14■□□□□ 0.97
NME3-204ENST00000563498 KRT17Q04695 432 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 SYCE2Q6PIF2 218 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 RASEFQ8IZ41 740 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 ASIC4Q96FT7 647 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms