RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CCND3P30281 292 aaPredicted RBP11.26□□□□□ -0.61
SMG1-208ENST00000563448 STX17P56962 302 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 DGKDQ16760 1214 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 RAET1EQ8TD07 263 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 FIZ1Q96SL8 496 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 TIPINQ9BVW5 301 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 RNPEPQ9H4A4 650 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 PARVGQ9HBI0 331 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 GPRC5CQ9NQ84 441 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 ERAP1Q9NZ08 941 aa11.26□□□□□ -0.61
SMG1-208ENST00000563448 SMTNL1A8MU46 457 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 BECN2A8MW95 431 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 SEPT4O43236 478 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 DUSP11O75319 330 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 HMGCRP04035 888 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 CASP5P51878 434 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 SOX10P56693 466 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 MYL5Q02045 173 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 PAK1Q13153 545 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 L1TD1Q5T7N2 865 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 MAP3K21Q5TCX8 1036 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 ENOX1Q8TC92 643 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 DHX33Q9H6R0 707 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 OLFML3Q9NRN5 406 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 RWDD2AQ9UIY3 292 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 TRIM49BA6NDI0 452 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 H3BRB1 525 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 HBP1O60381 514 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 MYBP10242 640 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 CNGA1P29973 690 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 PPP1R2P41236 205 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 PMS1P54277 932 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 PRMT2P55345 433 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 BEX3Q00994 111 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 STIM1Q13586 685 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 EMC2Q15006 297 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 FAM102BQ5T8I3 360 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 EPM2AIP1Q7L775 607 aaPredicted RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 DHTKD1Q96HY7 919 aaPredicted RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 AP5M1Q9H0R1 490 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 TUT1Q9H6E5 874 aaKnown RBP11.25□□□□□ -0.61
SMG1-208ENST00000563448 SEL1LQ9UBV2 794 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 PPME1Q9Y570 386 aa11.25□□□□□ -0.61
SMG1-208ENST00000563448 SYNRGQ9UMZ2 1314 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 MYADML2A6NDP7 307 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 AP5Z1O43299 807 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 MAFO75444 373 aaPredicted RBP11.24□□□□□ -0.61
SMG1-208ENST00000563448 PLS3P13797 630 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 CCNE1P24864 410 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 RFC5P40937 340 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 CPT1AP50416 773 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 POLGP54098 1239 aaPredicted RBP11.24□□□□□ -0.61
SMG1-208ENST00000563448 GJA9P57773 515 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 ODR4Q5SWX8 454 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 MYOCDQ8IZQ8 938 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 MCPH1Q8NEM0 835 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 SCFD1Q8WVM8 642 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 DRC1Q96MC2 740 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 UPF3AQ9H1J1 476 aaKnown RBP11.24□□□□□ -0.61
SMG1-208ENST00000563448 SEMA6BQ9H3T3 888 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
SMG1-208ENST00000563448 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
SMG1-208ENST00000563448 PSMA7O14818 248 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 ZNF720Q7Z2F6 126 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 ZNF507Q8TCN5 953 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 TRAPPC12Q8WVT3 735 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 BSNDQ8WZ55 320 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 KAT2BQ92831 832 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 P2RX5Q93086 422 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 FANCLQ9NW38 375 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 ZNF215Q9UL58 517 aaPredicted RBP11.23□□□□□ -0.61
SMG1-208ENST00000563448 PTCH2Q9Y6C5 1203 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 PCNTO95613 3336 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 IGKV6-21A0A0C4DH24 114 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
SMG1-208ENST00000563448 GCNT3O95395 438 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 F2P00734 622 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 MYL3P08590 195 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
SMG1-208ENST00000563448 INSRRP14616 1297 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 HOXD13P35453 343 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 PEX3P56589 373 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 NKX3-2P78367 333 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
SMG1-208ENST00000563448 ZC2HC1CQ53FD0 456 aaPredicted RBP11.23□□□□□ -0.61
SMG1-208ENST00000563448 ZNF484Q5JVG2 852 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 SPATA1Q5VX52 437 aa11.23□□□□□ -0.61
SMG1-208ENST00000563448 ANKRD40Q6AI12 368 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms