RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 VTNP04004 478 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 RPLP2P05387 115 aaKnown RBP9.56□□□□□ -0.88
UBR1-204ENST00000563239 RPA1P27694 616 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 PBX2P40425 430 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 WDR5P61964 334 aaKnown RBP9.56□□□□□ -0.88
UBR1-204ENST00000563239 DEFB103AP81534 67 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 SMAD3P84022 425 aaKnown RBP9.56□□□□□ -0.88
UBR1-204ENST00000563239 TBC1D8BQ0IIM8 1120 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 PKP1Q13835 747 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 PTPAQ15257 358 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 IER5Q5VY09 327 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBR1-204ENST00000563239 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 PIGOQ8TEQ8 1089 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 CEP170P1Q96L14 293 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 DHX33Q9H6R0 707 aaKnown RBP9.56□□□□□ -0.88
UBR1-204ENST00000563239 SUGCTQ9HAC7 445 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 TUFT1Q9NNX1 390 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 XPNPEP1Q9NQW7 623 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 ANKEF1Q9NU02 776 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 CLIC4Q9Y696 253 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 SLC4A7Q9Y6M7 1214 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 SQORQ9Y6N5 450 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 PTPRSQ13332 1948 aa9.56□□□□□ -0.88
UBR1-204ENST00000563239 EVPLQ92817 2033 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 ABHD14A-ACY1A0A1B0GW23 586 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 ACTN1P12814 892 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 XRCC6P12956 609 aaKnown RBP eCLIP9.55□□□□□ -0.88
UBR1-204ENST00000563239 CDC25AP30304 524 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 CD52P31358 61 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 RARRES1P49788 294 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 RABGGTBP53611 331 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 CRYBB1P53674 252 aaPredicted RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 GRIN1Q05586 938 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 IKBKEQ14164 716 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 KIZQ2M2Z5 673 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 XKR9Q5GH70 373 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 ARL6IP4Q66PJ3 421 aaKnown RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 POTEGQ6S5H5 508 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 DTHD1Q6ZMT9 781 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 TSHZ1Q6ZSZ6 1077 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 OTUD6AQ7L8S5 288 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 TMCO2Q7Z6W1 182 aaPredicted RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 RTN4RL1Q86UN2 441 aaPredicted RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 LINC01599Q8WXQ3 324 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 SEPT8Q92599 483 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 ZNF668Q96K58 619 aaPredicted RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 PBX4Q9BYU1 374 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 IFIH1Q9BYX4 1025 aaKnown RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 TMX1Q9H3N1 280 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 ERVK-5Q9HDB9 667 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 LRWD1Q9UFC0 647 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 YBX2Q9Y2T7 364 aaKnown RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 NOC2LQ9Y3T9 749 aaKnown RBP9.55□□□□□ -0.88
UBR1-204ENST00000563239 PPME1Q9Y570 386 aa9.55□□□□□ -0.88
UBR1-204ENST00000563239 ARID2Q68CP9 1835 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 CDH23Q9H251 3354 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 TRANK1O15050 2925 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 VWA3AA6NCI4 1184 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 MYOGP15173 224 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 ATP2A2P16615 1042 aaKnown RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 TMOD1P28289 359 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 CCT6AP40227 531 aaKnown RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 RFC5P40937 340 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 GPC3P51654 580 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 NLRP11P59045 1033 aaKnown RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 TMEM266Q2M3C6 531 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 GPR153Q6NV75 609 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 KCNK18Q7Z418 384 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 FAM228AQ86W67 206 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 KSR1Q8IVT5 923 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 HERC6Q8IVU3 1022 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 CRIPAKQ8N1N5 446 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 USP38Q8NB14 1042 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 APBB2Q92870 758 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 TMEM143Q96AN5 459 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 PNMA5Q96PV4 448 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 NACC1Q96RE7 527 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 USP28Q96RU2 1077 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 OSMRQ99650 979 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 MTIF3Q9H2K0 278 aaKnown RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 BMP2KQ9NSY1 1161 aaPredicted RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 SUCLA2Q9P2R7 463 aaPredicted RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 DBR1Q9UK59 544 aaKnown RBP9.54□□□□□ -0.88
UBR1-204ENST00000563239 PADI3Q9ULW8 664 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 AKT3Q9Y243 479 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 ZDHHC9Q9Y397 364 aa9.54□□□□□ -0.88
UBR1-204ENST00000563239 LOXHD1Q8IVV2 1947 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 M0QZ92 97 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 ENPP3O14638 875 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 MGEA5O60502 916 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 EFCAB14O75071 495 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 ARHGEF15O94989 841 aa9.53□□□□□ -0.88
UBR1-204ENST00000563239 ZSCAN22P10073 491 aaPredicted RBP9.53□□□□□ -0.88
UBR1-204ENST00000563239 DARSP14868 501 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms