RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 TMEM143Q96AN5 459 aa12.54□□□□□ -0.4
TSC2-218ENST00000562474 CCDC43Q96MW1 224 aaKnown RBP12.54□□□□□ -0.4
TSC2-218ENST00000562474 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
TSC2-218ENST00000562474 MMTAG2Q9BU76 263 aaKnown RBP12.54□□□□□ -0.4
TSC2-218ENST00000562474 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
TSC2-218ENST00000562474 AGO3Q9H9G7 860 aaKnown RBP12.54□□□□□ -0.4
TSC2-218ENST00000562474 CYP26B1Q9NR63 512 aa12.54□□□□□ -0.4
TSC2-218ENST00000562474 DDX19AQ9NUU7 478 aaKnown RBP12.54□□□□□ -0.4
TSC2-218ENST00000562474 TRPV2Q9Y5S1 764 aa12.54□□□□□ -0.4
TSC2-218ENST00000562474 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
TSC2-218ENST00000562474 E9PMD0 336 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 CD52P31358 61 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
TSC2-218ENST00000562474 DEFB103AP81534 67 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 LPIN1Q14693 890 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 EMC2Q15006 297 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 FAM117BQ6P1L5 589 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
TSC2-218ENST00000562474 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 C4orf19Q8IY42 314 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 LINC01465Q8N7H1 131 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 IGSF22Q8N9C0 903 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 ERMNQ8TAM6 284 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 LRRC15Q8TF66 581 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 PNMA5Q96PV4 448 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 GPRC5CQ9NQ84 441 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
TSC2-218ENST00000562474 PBX2P40425 430 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 PRPHP41219 470 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 RARRES1P49788 294 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 RABGGTBP53611 331 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 NLRP11P59045 1033 aaKnown RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 DNM1Q05193 864 aaKnown RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 STK38Q15208 465 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 FBXO47Q5MNV8 452 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
TSC2-218ENST00000562474 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 NEK9Q8TD19 979 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 TNPO1Q92973 898 aaKnown RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 NLRP4Q96MN2 994 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 MAP7D2Q96T17 732 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 POLR3CQ9BUI4 534 aaPredicted RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 CELF4Q9BZC1 486 aaKnown RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 CSRNP2Q9H175 543 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 ZSCAN16Q9H4T2 348 aaPredicted RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 TUFT1Q9NNX1 390 aa12.52□□□□□ -0.41
TSC2-218ENST00000562474 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
TSC2-218ENST00000562474 M0QZ92 97 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 LAD1O00515 517 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 MAGEB2O15479 319 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 DKC1O60832 514 aaKnown RBP eCLIP12.51□□□□□ -0.41
TSC2-218ENST00000562474 MAFO75444 373 aaPredicted RBP12.51□□□□□ -0.41
TSC2-218ENST00000562474 CXCL10P02778 98 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 SSBP05455 408 aaKnown RBP eCLIP12.51□□□□□ -0.41
TSC2-218ENST00000562474 MYOGP15173 224 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 RPA1P27694 616 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 RFC2P35250 354 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 GRB10Q13322 594 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 DHX8Q14562 1220 aaKnown RBP12.51□□□□□ -0.41
TSC2-218ENST00000562474 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 HAUS3Q68CZ6 603 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
TSC2-218ENST00000562474 IFIH1Q9BYX4 1025 aaKnown RBP12.51□□□□□ -0.41
TSC2-218ENST00000562474 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
TSC2-218ENST00000562474 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
TSC2-218ENST00000562474 RANBP2P49792 3224 aaKnown RBP12.51□□□□□ -0.41
TSC2-218ENST00000562474 A0A087WZ62 844 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 IGKV6-21A0A0C4DH24 114 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 ARHGEF35A5YM69 484 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 GPR32O75388 356 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 LYPLA2O95372 231 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 BRD1O95696 1058 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 GPC3P51654 580 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 WDR5P61964 334 aaKnown RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 RAD51AP2Q09MP3 1159 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 NFX1Q12986 1120 aaKnown RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 PLEKHG4Q58EX7 1191 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 IER5Q5VY09 327 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 CNKSR3Q6P9H4 555 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 CABP7Q86V35 215 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 FAM228AQ86W67 206 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 ASAP3Q8TDY4 903 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 NLRP7Q8WX94 980 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 EPSTI1Q96J88 318 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 MTRQ99707 1265 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
TSC2-218ENST00000562474 BHMT2Q9H2M3 363 aa12.5□□□□□ -0.41
TSC2-218ENST00000562474 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 853.5 ms