RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CTNNA1P35221 906 aaKnown RBP14.46□□□□□ -0.09
CLK3-206ENST00000562078 NAPAP54920 295 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 SPAG1Q07617 926 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 INF2Q27J81 1249 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 LRRC23Q53EV4 343 aaPredicted RBP14.46□□□□□ -0.09
CLK3-206ENST00000562078 CDC42EP5Q6NZY7 148 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 ANKRD23Q86SG2 305 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 CCDC170Q8IYT3 715 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 ANKS4BQ8N8V4 417 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 JDP2Q8WYK2 163 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 PLEKHG4BQ96PX9 1271 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 GSDMAQ96QA5 445 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 SYT15Q9BQS2 421 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 SH2D4AQ9H788 454 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 LRRC4CQ9HCJ2 640 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 ABCF3Q9NUQ8 709 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 WDR35Q9P2L0 1181 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 ZNRF3Q9ULT6 936 aa14.46□□□□□ -0.09
CLK3-206ENST00000562078 IGF2BP3O00425 579 aaKnown RBP eCLIP14.46□□□□□ -0.1
CLK3-206ENST00000562078 ADAM9Q13443 819 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 CUL3Q13618 768 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 RSBN1LQ6PCB5 846 aaPredicted RBP14.46□□□□□ -0.1
CLK3-206ENST00000562078 SH3RF1Q7Z6J0 888 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 GPIHBP1Q8IV16 184 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 NELFBQ8WX92 580 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 ZDHHC15Q96MV8 337 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 TRIM4Q9C037 500 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 TMEM165Q9HC07 324 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 VAT1LQ9HCJ6 419 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 SERPINB13Q9UIV8 391 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 STK38LQ9Y2H1 464 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 ASB3Q9Y575 518 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 FRMPD2Q68DX3 1309 aaPredicted RBP14.46□□□□□ -0.1
CLK3-206ENST00000562078 MYO3BQ8WXR4 1341 aa14.46□□□□□ -0.1
CLK3-206ENST00000562078 NFKBIEO00221 500 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
CLK3-206ENST00000562078 PAK1Q13153 545 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 HLTFQ14527 1009 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLK3-206ENST00000562078 APOBEC3HQ6NTF7 200 aaKnown RBP14.45□□□□□ -0.1
CLK3-206ENST00000562078 LRIG3Q6UXM1 1119 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 IRF2BP1Q8IU81 584 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 TLR10Q9BXR5 811 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 UBE2OQ9C0C9 1292 aaKnown RBP14.45□□□□□ -0.1
CLK3-206ENST00000562078 MTMR4Q9NYA4 1195 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 SEC63Q9UGP8 760 aaKnown RBP14.45□□□□□ -0.1
CLK3-206ENST00000562078 RWDD2AQ9UIY3 292 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 SERPINA10Q9UK55 444 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 BLOC1S6Q9UL45 172 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 PCDHAC2Q9Y5I4 1007 aa14.45□□□□□ -0.1
CLK3-206ENST00000562078 KRT16P08779 473 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 NOVP48745 357 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 RNASE9P60153 205 aaKnown RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 NCALDP61601 193 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 NFIAQ12857 509 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 BIRC3Q13489 604 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 GALNT17Q6IS24 598 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 TRPM8Q7Z2W7 1104 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 TEX9Q8N6V9 391 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 C4orf32Q8N8J7 132 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 PIGSQ96S52 555 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 IFIH1Q9BYX4 1025 aaKnown RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 UBA5Q9GZZ9 404 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 ZNHIT6Q9NWK9 470 aaKnown RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 ADAM22Q9P0K1 906 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 BIN2Q9UBW5 565 aaPredicted RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 SALL4Q9UJQ4 1053 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 MYH7BA7E2Y1 1941 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 TRIM49BA6NDI0 452 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 LGALS16A8MUM7 142 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 RARAP10276 462 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 TRIM21P19474 475 aaKnown RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 TPP2P29144 1249 aaPredicted RBP14.44□□□□□ -0.1
CLK3-206ENST00000562078 ALDH3A1P30838 453 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 POLE2P56282 527 aa14.44□□□□□ -0.1
CLK3-206ENST00000562078 UBOX5O94941 541 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 RASSF7Q02833 373 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 SPA17Q15506 151 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 CFAP221Q4G0U5 840 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 ERMARDQ5T6L9 678 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 RNF220Q5VTB9 566 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 ARL6IP4Q66PJ3 421 aaKnown RBP14.43□□□□□ -0.1
CLK3-206ENST00000562078 MYLK4Q86YV6 388 aaPredicted RBP14.43□□□□□ -0.1
CLK3-206ENST00000562078 RBM12BQ8IXT5 1001 aaKnown RBP14.43□□□□□ -0.1
CLK3-206ENST00000562078 ZNF507Q8TCN5 953 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 ZNF317Q96PQ6 595 aaPredicted RBP14.43□□□□□ -0.1
CLK3-206ENST00000562078 MRIQ9BWK5 157 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 ZMYND12Q9H0C1 365 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 USO1O60763 962 aaKnown RBP14.43□□□□□ -0.1
CLK3-206ENST00000562078 NPTXRO95502 500 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
CLK3-206ENST00000562078 SHMT1P34896 483 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 CCNG1P51959 295 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 CACNB3P54284 484 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 ILDR2Q71H61 639 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 CCDC42Q96M95 316 aa14.43□□□□□ -0.1
CLK3-206ENST00000562078 ELAC2Q9BQ52 826 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms