RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.6□□□□□ -0.55
CLK3-205ENST00000561673 C5orf67F2Z3F1 127 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 GPR182O15218 404 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 SLC37A4O43826 429 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 RB1P06400 928 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 XBP1P17861 261 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 CTNNB1P35222 781 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 ME3Q16798 604 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 MOXD1Q6UVY6 613 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 MIER3Q7Z3K6 550 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 NPAS4Q8IUM7 802 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 LRRC71Q8N4P6 559 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 LINC01465Q8N7H1 131 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 NECAB3Q96P71 396 aaPredicted RBP11.6□□□□□ -0.55
CLK3-205ENST00000561673 OSMRQ99650 979 aa11.6□□□□□ -0.55
CLK3-205ENST00000561673 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
CLK3-205ENST00000561673 DDX25Q9UHL0 483 aaKnown RBP11.6□□□□□ -0.55
CLK3-205ENST00000561673 CCDC194A0A1B0GVG4 234 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 DENND3A2RUS2 1198 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 STBD1O95210 358 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 LARGE1O95461 756 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 STAG3L1P0CL83 205 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 FDPSP14324 419 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 IBSPP21815 317 aaPredicted RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 TMOD1P28289 359 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 SARSP49591 514 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 NEK4P51957 841 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 NLRP11P59045 1033 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 TARBP2Q15633 366 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 EARS2Q5JPH6 523 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 PPP4R3AQ6IN85 833 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 PIK3AP1Q6ZUJ8 805 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 FAM228AQ86W67 206 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 BANK1Q8NDB2 785 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 ADAM2Q99965 735 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 NIFKQ9BYG3 293 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 ADAMTS10Q9H324 1103 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 RGS18Q9NS28 235 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 LRFN2Q9ULH4 789 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 AKT3Q9Y243 479 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 RWDD3Q9Y3V2 267 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 PCDHB7Q9Y5E2 793 aa11.59□□□□□ -0.55
CLK3-205ENST00000561673 MRPL42Q9Y6G3 142 aaKnown RBP11.59□□□□□ -0.55
CLK3-205ENST00000561673 BDP1A6H8Y1 2624 aa11.58□□□□□ -0.55
CLK3-205ENST00000561673 TMEM150BA6NC51 233 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 EML1O00423 815 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 GRM6O15303 877 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 CCNT1O60563 726 aaKnown RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 CENPBP07199 599 aaPredicted RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 GATMP50440 423 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 TBC1D8BQ0IIM8 1120 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 PAN2Q504Q3 1202 aaKnown RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 XKR3Q5GH77 459 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 TCEAL5Q5H9L2 206 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 ODR4Q5SWX8 454 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 FAM43BQ6ZT52 329 aaPredicted RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 SLC24A5Q71RS6 500 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 NEK8Q86SG6 692 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 CMTR2Q8IYT2 770 aaKnown RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 WASF1Q92558 559 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 GTF3C6Q969F1 213 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 ZNF668Q96K58 619 aaPredicted RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 FAM20AQ96MK3 541 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 CEP89Q96ST8 783 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 C11orf84Q9BUA3 381 aaPredicted RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
CLK3-205ENST00000561673 KCNMB3Q9NPA1 279 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 TTC3P53804 2025 aa11.58□□□□□ -0.56
CLK3-205ENST00000561673 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 C9IYK1 514 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 GCFC2P16383 781 aaKnown RBP11.57□□□□□ -0.56
CLK3-205ENST00000561673 EIF4BP23588 611 aaKnown RBP11.57□□□□□ -0.56
CLK3-205ENST00000561673 GPC3P51654 580 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 FAM189BP81408 668 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 NR5A1Q13285 461 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 DRP2Q13474 957 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 DSC3Q14574 896 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 MTERF2Q49AM1 385 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 FAM102BQ5T8I3 360 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 NSUN7Q8NE18 718 aaKnown RBP11.57□□□□□ -0.56
CLK3-205ENST00000561673 HAS1Q92839 578 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 SH2D3AQ9BRG2 576 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 NSUN3Q9H649 340 aaKnown RBP11.57□□□□□ -0.56
CLK3-205ENST00000561673 ALG13Q9NP73 1137 aaKnown RBP11.57□□□□□ -0.56
CLK3-205ENST00000561673 C1orf112Q9NSG2 853 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
CLK3-205ENST00000561673 VAV3Q9UKW4 847 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 PLAGL2Q9UPG8 496 aa11.57□□□□□ -0.56
CLK3-205ENST00000561673 IGKV6-21A0A0C4DH24 114 aa11.56□□□□□ -0.56
CLK3-205ENST00000561673 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
CLK3-205ENST00000561673 JAK2O60674 1132 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms