RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 KIRREL3Q8IZU9 778 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 MIEF2Q96C03 454 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 INPP4AQ96PE3 977 aaPredicted RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 FLOT1O75955 427 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 FAM13AO94988 1023 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 TNNC1P63316 161 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 ACTN3Q08043 901 aaPredicted RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 SF3B2Q13435 895 aaKnown RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 STRIP1Q5VSL9 837 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 ALKBH5Q6P6C2 394 aaKnown RBP11.96□□□□□ -0.49
NEIL1-202ENST00000561643 KLHL7Q8IXQ5 586 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 PIGOQ8TEQ8 1089 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 GOLPH3Q9H4A6 298 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 GDF3Q9NR23 364 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 GCNT4Q9P109 453 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 VAV3Q9UKW4 847 aa11.96□□□□□ -0.49
NEIL1-202ENST00000561643 ASTN1O14525 1302 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 EML1O00423 815 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 EIF3HO15372 352 aaKnown RBP eCLIP11.96□□□□□ -0.5
NEIL1-202ENST00000561643 CHMP2AO43633 222 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 EYA4O95677 639 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 CIITAP33076 1130 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 KCNA1Q09470 495 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 CTTNQ14247 550 aaKnown RBP11.96□□□□□ -0.5
NEIL1-202ENST00000561643 VPS36Q86VN1 386 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 NAGPAQ9UK23 515 aa11.96□□□□□ -0.5
NEIL1-202ENST00000561643 GRIN2DO15399 1336 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 ECE2O60344 883 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 KIAA0754O94854 1291 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 NF2P35240 595 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 FNTAP49354 379 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 GUCY2FP51841 1108 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 NNTQ13423 1086 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 EPHA7Q15375 998 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 DACT2Q5SW24 774 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 SLC30A10Q6XR72 485 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
NEIL1-202ENST00000561643 CCDC43Q96MW1 224 aaKnown RBP11.95□□□□□ -0.5
NEIL1-202ENST00000561643 SH3GL2Q99962 352 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 POLR3CQ9BUI4 534 aaPredicted RBP11.95□□□□□ -0.5
NEIL1-202ENST00000561643 TDRD3Q9H7E2 651 aaKnown RBP11.95□□□□□ -0.5
NEIL1-202ENST00000561643 SLC16A3O15427 465 aaKnown RBP11.95□□□□□ -0.5
NEIL1-202ENST00000561643 MMP10P09238 476 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 SARNPP82979 210 aaKnown RBP11.95□□□□□ -0.5
NEIL1-202ENST00000561643 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 CFAP58Q5T655 872 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 DPY19L2P1Q6NXN4 242 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 MYCT1Q8N699 235 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 USP38Q8NB14 1042 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 SLC35C1Q96A29 364 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 ZIM3Q96PE6 472 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 MRIQ9BWK5 157 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 MCM8Q9UJA3 840 aa11.95□□□□□ -0.5
NEIL1-202ENST00000561643 BTNL10A8MVZ5 291 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 TMCO5BA8MYB1 307 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 NDUFAB1O14561 156 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 OPLAHO14841 1288 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 C21orf2O43822 256 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 PPP1R12BO60237 982 aaPredicted RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 CEP104O60308 925 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 KIF4AO95239 1232 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 CFBP00751 764 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 FAM153BP0C7A2 387 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 HDLBPQ00341 1268 aaKnown RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 FAM153CQ494X1 144 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 RINT1Q6NUQ1 792 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 GJB7Q6PEY0 223 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 ARL8AQ96BM9 186 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 FAM153AQ9UHL3 310 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 PRR12Q9ULL5 1215 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 PPP1R12AO14974 1030 aaPredicted RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 GAP43P17677 238 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 JAG1P78504 1218 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 PDCLQ13371 301 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 COL23A1Q86Y22 540 aaPredicted RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 ZNF513Q8N8E2 541 aaPredicted RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 CASKIN2Q8WXE0 1202 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 FAXDC2Q96IV6 333 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 ODF2LQ9ULJ1 636 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 RAD51CO43502 376 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 SKAP2O75563 359 aaPredicted RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 NMT1P30419 496 aaKnown RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 PRKCIP41743 596 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 NBPF20Q3BBV1 942 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 FAM186BQ8IYM0 893 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 CSRNP1Q96S65 589 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 SERPINA10Q9UK55 444 aa11.94□□□□□ -0.5
NEIL1-202ENST00000561643 AJAP1Q9UKB5 411 aaPredicted RBP11.94□□□□□ -0.5
NEIL1-202ENST00000561643 A0A1W2PRG0 241 aa11.93□□□□□ -0.5
NEIL1-202ENST00000561643 CHUKO15111 745 aa11.93□□□□□ -0.5
NEIL1-202ENST00000561643 KRT14P02533 472 aa11.93□□□□□ -0.5
NEIL1-202ENST00000561643 H2AFZP0C0S5 128 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms