RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 HHIPL1Q96JK4 782 aa7.45□□□□□ -1.22
LRRC28-220ENST00000561253 MMP19Q99542 508 aa7.45□□□□□ -1.22
LRRC28-220ENST00000561253 G6PC3Q9BUM1 346 aa7.45□□□□□ -1.22
LRRC28-220ENST00000561253 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
LRRC28-220ENST00000561253 API5Q9BZZ5 524 aaKnown RBP7.45□□□□□ -1.22
LRRC28-220ENST00000561253 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
LRRC28-220ENST00000561253 TRMT112Q9UI30 125 aaKnown RBP7.45□□□□□ -1.22
LRRC28-220ENST00000561253 TMEFF2Q9UIK5 374 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-220ENST00000561253 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.45□□□□□ -1.22
LRRC28-220ENST00000561253 SH3TC1Q8TE82 1336 aa7.45□□□□□ -1.22
LRRC28-220ENST00000561253 GRM8O00222 908 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 HYAL3O43820 417 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 EFCAB14O75071 495 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 APPP05067 770 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 NBPF7P0C2Y1 421 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 C6orf222P0C671 652 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 DPEP1P16444 411 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 CHRNA5P30532 468 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 KIR2DL1P43626 348 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 KIR2DL2P43627 348 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 TGFB2P61812 414 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 CHRNEQ04844 493 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 SF3B3Q15393 1217 aaKnown RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 TESK1Q15569 626 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 SLC14A2Q15849 920 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 FNDC3BQ53EP0 1204 aaKnown RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 EPHA10Q5JZY3 1008 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 C20orf194Q5TEA3 1177 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 ZKSCAN2Q63HK3 967 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 STYK1Q6J9G0 422 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 PPP1R42Q7Z4L9 355 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 SPPL2CQ8IUH8 684 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 CCDC103Q8IW40 242 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 TMEM52Q8NDY8 209 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 PHF20Q9BVI0 1012 aa7.44□□□□□ -1.22
LRRC28-220ENST00000561253 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
LRRC28-220ENST00000561253 BRCA1P38398 1863 aaKnown RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 A0A0G2JLW4 131 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 FADS2P1A8MWK0 482 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 AQP7O14520 342 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 IRS4O14654 1257 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 PLIN1O60240 522 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 ADAMTS4O75173 837 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 USP2O75604 605 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 RFPL3O75679 317 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 CSF1RP07333 972 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 CCT4P50991 539 aaKnown RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 GYS2P54840 703 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 RTP1P59025 263 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 FOXO4P98177 505 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 NEXNQ0ZGT2 675 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 PABPC4Q13310 644 aaKnown RBP eCLIP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 RABL6Q3YEC7 729 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 KCNT2Q6UVM3 1135 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 RSPO2Q6UXX9 243 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-220ENST00000561253 CEP128Q6ZU80 1094 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 UBE3BQ7Z3V4 1068 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 OXR1Q8N573 874 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 TMEM57Q8N5G2 664 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 ANKRD44Q8N8A2 993 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 ZFYVE21Q9BQ24 234 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 GPR27Q9NS67 375 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 EBF1Q9UH73 591 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 PLAAQ9Y263 795 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 TRAF6Q9Y4K3 522 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 NPFFR2Q9Y5X5 522 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 RTL9Q8NET4 1388 aa7.43□□□□□ -1.22
LRRC28-220ENST00000561253 LAMB2P55268 1798 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 DLEC1Q9Y238 1755 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-220ENST00000561253 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 MYO1BO43795 1136 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 NPHS1O60500 1241 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 PDE6BP35913 854 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 RRP1P56182 461 aaKnown RBP7.42□□□□□ -1.22
LRRC28-220ENST00000561253 ST5P78524 1137 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 INF2Q27J81 1249 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 TRIM61Q5EBN2 209 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 MBLAC2Q68D91 279 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 SLC4A10Q6U841 1118 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 ZNF662Q6ZS27 426 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 IFNL3Q8IZI9 196 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 TTLL11Q8NHH1 800 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 PANK1Q8TE04 598 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 FRAT1Q92837 279 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-220ENST00000561253 NINJ1Q92982 152 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 SUCLG2Q96I99 432 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 CLUHP3Q96NS8 147 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 MEIS3Q99687 375 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
LRRC28-220ENST00000561253 A0A1W2PQ27 194 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 A0A1W2PQ64 194 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 A0A1W2PQC6 194 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 A0A1W2PQD8 194 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 C7orf72A4D263 438 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 FITM1A5D6W6 292 aa7.41□□□□□ -1.22
LRRC28-220ENST00000561253 WTIPA6NIX2 430 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms