RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ADGRA3Q8IWK6 1321 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 POU3F3P20264 500 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 NPEPPSP55786 919 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 TFF2Q03403 129 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 PAK2Q13177 524 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 NBR1Q14596 966 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 RDM1Q8NG50 284 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 WASF1Q92558 559 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 ZNF689Q96CS4 500 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 FAM167AQ96KS9 214 aa14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
CHRNA3-208ENST00000561128 M0QZ92 97 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 DGKIO75912 1065 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 XBP1P17861 261 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 GPC3P51654 580 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 NLRP11P59045 1033 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 CYP4A11Q02928 519 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 NFX1Q12986 1120 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 DSC3Q14574 896 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 PAN2Q504Q3 1202 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 EPC2Q52LR7 807 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 NCAPH2Q6IBW4 605 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 NME8Q8N427 588 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 FBXO22Q8NEZ5 403 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 DYDC2Q96IM9 177 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 NIFKQ9BYG3 293 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 RNF19AQ9NV58 838 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 ST3GAL5Q9UNP4 418 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 AKT3Q9Y243 479 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 MRPL42Q9Y6G3 142 aaKnown RBP14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 SQORQ9Y6N5 450 aa14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 FNDC1Q4ZHG4 1894 aaPredicted RBP14.24□□□□□ -0.13
CHRNA3-208ENST00000561128 PLXNA4Q9HCM2 1894 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 A0A087WWV3 80 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 IGKV6-21A0A0C4DH24 114 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 DLL1O00548 723 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 RPS6KA5O75582 802 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 CSPG5O95196 566 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 CRYBB1P53674 252 aaPredicted RBP14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 CTTNQ14247 550 aaKnown RBP14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 XKR3Q5GH77 459 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 KSR1Q8IVT5 923 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 FAM20AQ96MK3 541 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 LXNQ9BS40 222 aa14.23□□□□□ -0.13
CHRNA3-208ENST00000561128 POTEMA6NI47 508 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 C9IYK1 514 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 TBX3O15119 743 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 FGFR1P11362 822 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 PSMC5P62195 406 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 TBC1D8BQ0IIM8 1120 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 NPAS4Q8IUM7 802 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 TMEM192Q8IY95 271 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 TNPO1Q92973 898 aaKnown RBP14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 C8orf76Q96K31 380 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 MTMR9Q96QG7 549 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 ADAM2Q99965 735 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 THEGQ9P2T0 379 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 CEP131Q9UPN4 1083 aa14.22□□□□□ -0.13
CHRNA3-208ENST00000561128 GRM6O15303 877 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 MAGEB2O15479 319 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 NEMFO60524 1076 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 RPLP2P05387 115 aaKnown RBP14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 DARSP14868 501 aaKnown RBP14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 ATF7P17544 494 aaPredicted RBP14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 MCM7P33993 719 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 CTNNB1P35222 781 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 QARSP47897 775 aaKnown RBP14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 KCNQ1P51787 676 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 CALCRLQ16602 461 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 LLPHQ9BRT6 129 aaKnown RBP14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 XPNPEP1Q9NQW7 623 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 CYP26B1Q9NR63 512 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 NRBP2Q9NSY0 501 aa14.21□□□□□ -0.13
CHRNA3-208ENST00000561128 A0A087WZ62 844 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 DNAJB1P25685 340 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 SARSP49591 514 aaKnown RBP14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 TRIM29Q14134 588 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 RABEP1Q15276 862 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 EPHA7Q15375 998 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 FBXO18Q8NFZ0 1043 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 CLP1Q92989 425 aaKnown RBP14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 TMEM143Q96AN5 459 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 NECAB3Q96P71 396 aaPredicted RBP14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 MAP7D2Q96T17 732 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 EIF2AK1Q9BQI3 630 aaKnown RBP14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 FDXACB1Q9BRP7 624 aaPredicted RBP14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 SH2B1Q9NRF2 756 aaPredicted RBP14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 PCDHGC5Q9Y5F6 944 aa14.2□□□□□ -0.14
CHRNA3-208ENST00000561128 H3BNC9 293 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms