RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SLC39A11Q8N1S5 342 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 LRRC43Q8N309 656 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 CYP2W1Q8TAV3 490 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 ZNF558Q96NG5 402 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 PPP1R16BQ96T49 567 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 OSMRQ99650 979 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 TMEM117Q9H0C3 514 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 OSBPL3Q9H4L5 887 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 AZI2Q9H6S1 392 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 ELAC1Q9H777 363 aaKnown RBP11.34□□□□□ -0.59
TPM1-225ENST00000560679 ATP6V0A4Q9HBG4 840 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 LIMD1Q9UGP4 676 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 PUF60Q9UHX1 559 aaKnown RBP11.34□□□□□ -0.59
TPM1-225ENST00000560679 EVPLQ92817 2033 aa11.34□□□□□ -0.59
TPM1-225ENST00000560679 IGKV6D-21A0A0A0MT36 114 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 EOMESO95936 686 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 CYP21A2P08686 494 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 PPM1AP35813 382 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 STAT5BP51692 787 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 CATIPQ7Z7H3 387 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 MRPL43Q8N983 215 aaKnown RBP11.33□□□□□ -0.6
TPM1-225ENST00000560679 DTWD2Q8NBA8 298 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 EXOC6Q8TAG9 804 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
TPM1-225ENST00000560679 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 SPG21Q9NZD8 308 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 NFASCO94856 1347 aa11.33□□□□□ -0.6
TPM1-225ENST00000560679 COL1A2P08123 1366 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 GPR182O15218 404 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 GPR32O75388 356 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 ATG7O95352 703 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 C22orf31O95567 290 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 CCNE2O96020 404 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 EPCAMP16422 314 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 FAM43BQ6ZT52 329 aaPredicted RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 TMEM173Q86WV6 379 aaPredicted RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 CCDC60Q8IWA6 550 aaPredicted RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 CMTR1Q8N1G2 835 aaKnown RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 SRBD1Q8N5C6 995 aaKnown RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 PSTPIP2Q9H939 334 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 LY9Q9HBG7 655 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
TPM1-225ENST00000560679 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 DUSP12Q9UNI6 340 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
TPM1-225ENST00000560679 TPRP12270 2363 aaKnown RBP11.31□□□□□ -0.6
TPM1-225ENST00000560679 GPR179Q6PRD1 2367 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 HIP1O00291 1037 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 MAFGO15525 162 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 HBP1O60381 514 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 KRT37O76014 449 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 VTNP04004 478 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 ATP4AP20648 1035 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 SLC26A2P50443 739 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
TPM1-225ENST00000560679 KRT17Q04695 432 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 TRDNQ13061 729 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
TPM1-225ENST00000560679 DGLUCYQ7Z3D6 616 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 MB21D2Q8IYB1 491 aaPredicted RBP11.31□□□□□ -0.6
TPM1-225ENST00000560679 ZNF654Q8IZM8 581 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 SIX5Q8N196 739 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 AUTS2Q8WXX7 1259 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 MAP3K14Q99558 947 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
TPM1-225ENST00000560679 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 DZANK1Q9NVP4 752 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
TPM1-225ENST00000560679 R4GN57 208 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 FANCMQ8IYD8 2048 aa11.31□□□□□ -0.6
TPM1-225ENST00000560679 ACACBO00763 2458 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.3□□□□□ -0.6
TPM1-225ENST00000560679 ERICH2A1L162 156 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 SPDYE3A6NKU9 549 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 NT5C1B-RDH14C9J2C7 533 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 E7EWF7 191 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 HOXA2O43364 376 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 NARSO43776 548 aaKnown RBP11.3□□□□□ -0.6
TPM1-225ENST00000560679 DDAH1O94760 285 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 LMNAP02545 664 aaKnown RBP11.3□□□□□ -0.6
TPM1-225ENST00000560679 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 PTH1RQ03431 593 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 ODR4Q5SWX8 454 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 ABHD15Q6UXT9 468 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
TPM1-225ENST00000560679 KIAA2013Q8IYS2 634 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 PLCD3Q8N3E9 789 aa11.3□□□□□ -0.6
TPM1-225ENST00000560679 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
TPM1-225ENST00000560679 SLC22A17Q8WUG5 538 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms