RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 ARHGEF37A1IGU5 675 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 K7ERI5 159 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 KRT38O76015 456 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 LDHAP00338 332 aaKnown RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 PYGBP11216 843 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 OSBPP22059 807 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 PMLP29590 882 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 PEX3P56589 373 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 MAGOHP61326 146 aaKnown RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
SYNM-203ENST00000560674 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 TTC13Q8NBP0 860 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 LCMT1Q9UIC8 334 aa13.55□□□□□ -0.24
SYNM-203ENST00000560674 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 ANKRD65E5RJM6 399 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 ZRANB2O95218 330 aaKnown RBP eCLIP13.54□□□□□ -0.24
SYNM-203ENST00000560674 PMS2P54278 862 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 FMR1NBQ8N0W7 255 aaPredicted RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 AP5M1Q9H0R1 490 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 POLR1AO95602 1720 aaPredicted RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 SFI1A8K8P3 1242 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 WDR64B1ANS9 1081 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 PPP2R2AP63151 447 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 KIF19Q2TAC6 998 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 GSPT2Q8IYD1 628 aaKnown RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 PARD3BQ8TEW8 1205 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 LRRIQ1Q96JM4 1722 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 H0Y3Z8 333 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 KLHL38Q2WGJ6 581 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 SUCLA2Q9P2R7 463 aaPredicted RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 HEG1Q9ULI3 1381 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 NR3C1P04150 777 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 CEP19Q96LK0 163 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 OSBPL9Q96SU4 736 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 NGRNQ9NPE2 291 aaKnown RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 GJB4Q9NTQ9 266 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 SERPINB2P05120 415 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 PRCPP42785 496 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 PFKFB3Q16875 520 aaPredicted RBP13.54□□□□□ -0.24
SYNM-203ENST00000560674 RNF139Q8WU17 664 aa13.54□□□□□ -0.24
SYNM-203ENST00000560674 PAMP19021 973 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 BAG6P46379 1132 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
SYNM-203ENST00000560674 RAD54LQ92698 747 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 MCAMP43121 646 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 EPHB1P54762 984 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 STOML1Q9UBI4 398 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 PRDM15P57071 1507 aaPredicted RBP13.53□□□□□ -0.24
SYNM-203ENST00000560674 PVALEFA0A1B0GWK0 134 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 ZSCAN20P17040 1043 aaPredicted RBP13.53□□□□□ -0.24
SYNM-203ENST00000560674 CASP1P29466 404 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 TFDP2Q14188 446 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
SYNM-203ENST00000560674 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
SYNM-203ENST00000560674 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 EXT2Q93063 718 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 NEDD4P46934 1319 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 WDR19Q8NEZ3 1342 aa13.53□□□□□ -0.24
SYNM-203ENST00000560674 KPNA7A9QM74 516 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 HAUS5O94927 633 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 Q3C1V9 767 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 ICE2Q659A1 982 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.24
SYNM-203ENST00000560674 ACAD11Q709F0 780 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 NOP9Q86U38 636 aaKnown RBP13.52□□□□□ -0.24
SYNM-203ENST00000560674 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 ZBTB18Q99592 522 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.24
SYNM-203ENST00000560674 JAK3P52333 1124 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 CCDC144BQ3MJ40 725 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 PPP6R3Q5H9R7 873 aaPredicted RBP13.52□□□□□ -0.24
SYNM-203ENST00000560674 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 CDC26Q8NHZ8 85 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 KIFC3Q9BVG8 833 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 USP6P35125 1406 aa13.52□□□□□ -0.24
SYNM-203ENST00000560674 CPSF1Q10570 1443 aaKnown RBP13.52□□□□□ -0.24
SYNM-203ENST00000560674 POTEMA6NI47 508 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 MCF2P10911 925 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 PIGOQ8TEQ8 1089 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 CFAP74Q9C0B2 1584 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
SYNM-203ENST00000560674 ANXA13P27216 316 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 KCNH2Q12809 1159 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 C1orf146Q5VVC0 180 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 NLRP14Q86W24 1093 aa13.52□□□□□ -0.25
SYNM-203ENST00000560674 CAPN11Q9UMQ6 739 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms