RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MAFAQ8NHW3 353 aaPredicted RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 NLRP7Q8WX94 980 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 ARNTL2Q8WYA1 636 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 DYDC2Q96IM9 177 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 ZNF668Q96K58 619 aaPredicted RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 LXNQ9BS40 222 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 FTHL17Q9BXU8 183 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 NIFKQ9BYG3 293 aaKnown RBP14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 CDHR5Q9HBB8 845 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 RGL1Q9NZL6 768 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 MTUS1Q9ULD2 1270 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 SQORQ9Y6N5 450 aa14.54□□□□□ -0.08
CTDSPL2-209ENST00000560620 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 DENND3A2RUS2 1198 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 CRYBB1P53674 252 aaPredicted RBP14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 TAP1Q03518 808 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 OTUD6AQ7L8S5 288 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 SLC7A3Q8WY07 619 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 PPM1EQ8WY54 764 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 TOP1MTQ969P6 601 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 CEP170P1Q96L14 293 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 NOC2LQ9Y3T9 749 aaKnown RBP14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 CDH23Q9H251 3354 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 COL6A3P12111 3177 aa14.53□□□□□ -0.08
CTDSPL2-209ENST00000560620 ENPP3O14638 875 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 GPR182O15218 404 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 YWHABP31946 246 aaKnown RBP14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 TECP42680 631 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 POLGP54098 1239 aaPredicted RBP14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 NPEPPSP55786 919 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 TARBP2Q15633 366 aaKnown RBP14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 XKR9Q5GH70 373 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 ANO5Q75V66 913 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 MICALL1Q8N3F8 863 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 SLC17A8Q8NDX2 589 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 EIF2AK1Q9BQI3 630 aaKnown RBP14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 JPH2Q9BR39 696 aaPredicted RBP14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 TMEM60Q9H2L4 133 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 CYP26B1Q9NR63 512 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 BMP2KQ9NSY1 1161 aaPredicted RBP14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 LRFN2Q9ULH4 789 aa14.52□□□□□ -0.09
CTDSPL2-209ENST00000560620 MYO9BQ13459 2157 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 POTEMA6NI47 508 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 RFXAPO00287 272 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 GPR32O75388 356 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 STBD1O95210 358 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 OR52Z1P0C646 297 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 U2AF2P26368 475 aaKnown RBP eCLIP14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 TRAPPC10P48553 1259 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 NBR1Q14596 966 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 RHPN2Q8IUC4 686 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 C4orf19Q8IY42 314 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 EXOC8Q8IYI6 725 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 MTMR9Q96QG7 549 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 TGS1Q96RS0 853 aaKnown RBP14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 SUCLA2Q9P2R7 463 aaPredicted RBP14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 WRAP73Q9P2S5 460 aaPredicted RBP14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 ST3GAL5Q9UNP4 418 aa14.51□□□□□ -0.09
CTDSPL2-209ENST00000560620 LINC01553A4QN01 128 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 MAFO75444 373 aaPredicted RBP14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 SLITRK3O94933 977 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 STAG3L1P0CL83 205 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 GPC3P51654 580 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 HTRA4P83105 476 aaPredicted RBP14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 ORC2Q13416 577 aaPredicted RBP14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 DRP2Q13474 957 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 CCDC85BQ15834 202 aaPredicted RBP14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 LARP1BQ659C4 914 aaKnown RBP14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 ZNF710Q8N1W2 664 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 ERMNQ8TAM6 284 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 NEK9Q8TD19 979 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 NLRP4Q96MN2 994 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 ERVK-5Q9HDB9 667 aa14.5□□□□□ -0.09
CTDSPL2-209ENST00000560620 CHD9Q3L8U1 2897 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 ZBTB39O15060 712 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 ZSCAN20P17040 1043 aaPredicted RBP14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 EIF4BP23588 611 aaKnown RBP14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 RFC5P40937 340 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 CDC42EP1Q00587 391 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 ADGRE1Q14246 886 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 SPRED2Q7Z698 418 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 FAM228AQ86W67 206 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 LINC01465Q8N7H1 131 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 ADAM2Q99965 735 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 GCOM2Q9BZD3 368 aaPredicted RBP14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 ADAMTS10Q9H324 1103 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 TMX1Q9H3N1 280 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 PCDHB6Q9Y5E3 794 aa14.49□□□□□ -0.09
CTDSPL2-209ENST00000560620 A0A087WZ62 844 aa14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 CSDE1O75534 798 aaKnown RBP14.48□□□□□ -0.09
CTDSPL2-209ENST00000560620 FGFR4P22455 802 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms