RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ENC1O14682 589 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 SART1O43290 800 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 GDF11O95390 407 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 PAEPP09466 180 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 PDHBP11177 359 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 HSPA9P38646 679 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 KIF11P52732 1056 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 MRPL12P52815 198 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 ZNF174Q15697 407 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 ZKSCAN8Q15776 578 aaPredicted RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 WLSQ5T9L3 541 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 NAA35Q5VZE5 725 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 TTI2Q6NXR4 508 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 CRELD2Q6UXH1 353 aaPredicted RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 KRT25Q7Z3Z0 450 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 VPS36Q86VN1 386 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 BLIDQ8IZY5 108 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 SYCE1Q8N0S2 351 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 IQCKQ8N0W5 287 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 SRBD1Q8N5C6 995 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 GBP7Q8N8V2 638 aaPredicted RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 CD99L2Q8TCZ2 262 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 ZNF473Q8WTR7 871 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 CENPTQ96BT3 561 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 CNOT6LQ96LI5 555 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 PARK7Q99497 189 aaKnown RBP9.34□□□□□ -0.91
CCDC33-209ENST00000560565 CHP1Q99653 195 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 C7orf25Q9BPX7 421 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 TRIM17Q9Y577 477 aa9.34□□□□□ -0.91
CCDC33-209ENST00000560565 KIAA0100Q14667 2235 aaKnown RBP9.33□□□□□ -0.92
CCDC33-209ENST00000560565 B4DLN1 442 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 KLRF2D3W0D1 207 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 PLEKHA8P1O95397 391 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 GH2P01242 217 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 SERPING1P05155 500 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 GCFC2P16383 781 aaKnown RBP9.33□□□□□ -0.92
CCDC33-209ENST00000560565 GNA11P29992 359 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 ELF1P32519 619 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 GUCY1A2P33402 732 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 HMGCS2P54868 508 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 JAG1P78504 1218 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 ICA1Q05084 483 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 GRIN1Q05586 938 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 C2orf54Q08AI8 447 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 ZNF543Q08ER8 600 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 KIF22Q14807 665 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 PKN1Q16512 942 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 CDC37Q16543 378 aaPredicted RBP9.33□□□□□ -0.92
CCDC33-209ENST00000560565 KIAA0753Q2KHM9 967 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 TMEM266Q2M3C6 531 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 LACTB2Q53H82 288 aaPredicted RBP9.33□□□□□ -0.92
CCDC33-209ENST00000560565 WDR59Q6PJI9 974 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
CCDC33-209ENST00000560565 SGSM3Q96HU1 749 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 GMCL1Q96IK5 515 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 RUNDC3BQ96NL0 473 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 CCT8L2Q96SF2 557 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 WDR18Q9BV38 432 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 ISCUQ9H1K1 167 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 SLITRK6Q9H5Y7 841 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 RIOX1Q9H6W3 641 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 ATP6V0A4Q9HBG4 840 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 FAM114A2Q9NRY5 505 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 VPS54Q9P1Q0 977 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 CEP72Q9P209 647 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 ZBTB21Q9ULJ3 1066 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 SLC45A1Q9Y2W3 748 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 STK24Q9Y6E0 443 aa9.33□□□□□ -0.92
CCDC33-209ENST00000560565 V9GY48 417 aaPredicted RBP9.33□□□□□ -0.92
CCDC33-209ENST00000560565 A0A087X0B3 334 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 C19orf81C9J6K1 198 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 USP17L10C9JJH3 530 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 DNAJC8O75937 253 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 GFPT2O94808 682 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 HEXIM1O94992 359 aaKnown RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 LUC7L3O95232 432 aaKnown RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 CYP2C8P10632 490 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 EEF2P13639 858 aaKnown RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 BACE1P56817 501 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 IRX1P78414 480 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 TRAF1Q13077 416 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 PABPC4Q13310 644 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 SHROOM1Q2M3G4 852 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 CCDC38Q502W7 563 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 FBXO46Q6PJ61 603 aaPredicted RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 C17orf99Q6UX52 265 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 OTOP1Q7RTM1 612 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 PARP9Q8IXQ6 854 aa9.32□□□□□ -0.92
CCDC33-209ENST00000560565 GUF1Q8N442 669 aaKnown RBP9.32□□□□□ -0.92
CCDC33-209ENST00000560565 MYCBPAPQ8TBZ2 947 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms