RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 PLA2G4FQ68DD2 849 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 KLHL10Q6JEL2 608 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 EPM2AIP1Q7L775 607 aaPredicted RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 SFR1Q86XK3 245 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 FAM178BQ8IXR5 827 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 DAW1Q8N136 415 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 OR6J1Q8NGC5 347 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF507Q8TCN5 953 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ATP8B4Q8TF62 1192 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 NOC3LQ8WTT2 800 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ERO1AQ96HE7 468 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 TSG101Q99816 390 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 JPH2Q9BR39 696 aaPredicted RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ARHGAP39Q9C0H5 1083 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 DHX33Q9H6R0 707 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 MRPL44Q9H9J2 332 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ATP6V0A4Q9HBG4 840 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 FANCLQ9NW38 375 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 SRRDQ9UH36 339 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF215Q9UL58 517 aaPredicted RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 GABRQQ9UN88 632 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 MAPK8IP1Q9UQF2 711 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 GNEQ9Y223 722 aaKnown RBP9.52□□□□□ -0.89
TRAF3-209ENST00000560463 NFE2L3Q9Y4A8 694 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 TELO2Q9Y4R8 837 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 PCDHB13Q9Y5F0 798 aa9.52□□□□□ -0.89
TRAF3-209ENST00000560463 A6NJR5 290 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 RSPH10B2B2RC85 870 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 H0YCG3 227 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 GPR25O00155 361 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 PDXKO00764 312 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 FKTNO75072 461 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 MAFO75444 373 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 LGALS2P05162 132 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 MMP3P08254 477 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 RSPH10BP0C881 870 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 PLS3P13797 630 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 AKR1A1P14550 325 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF18P17022 549 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 CDK11BP21127 795 aaKnown RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 CPT1AP50416 773 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 SMTNP53814 917 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 POLGP54098 1239 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 MAPK7Q13164 816 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 PLCB4Q15147 1175 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 TARBP2Q15633 366 aaKnown RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF484Q5JVG2 852 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 TMEM63BQ5T3F8 832 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 CDKAL1Q5VV42 579 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 ZNF720Q7Z2F6 126 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 FAM114A1Q8IWE2 563 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 AFG1LQ8WV93 481 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 SLC7A3Q8WY07 619 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 PDLIM2Q96JY6 352 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 MED15Q96RN5 788 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 CTAGE1Q96RT6 745 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 NTPCRQ9BSD7 190 aaKnown RBP9.51□□□□□ -0.89
TRAF3-209ENST00000560463 TRIM5Q9C035 493 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 AP5M1Q9H0R1 490 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 HSD3B7Q9H2F3 369 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 THAP9Q9H5L6 903 aa9.51□□□□□ -0.89
TRAF3-209ENST00000560463 TMEM150BA6NC51 233 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 H3BRB1 525 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 CBFA2T2O43439 604 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 KPNA6O60684 536 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 DUSP11O75319 330 aaKnown RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 GCNT3O95395 438 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 ADCY5O95622 1261 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TPM3P06753 285 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 CYBAP13498 195 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 EEF1GP26641 437 aaKnown RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 CDC25BP30305 580 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 NCKAP1LP55160 1127 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 STX17P56962 302 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 PRKCZQ05513 592 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TBC1D8BQ0IIM8 1120 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 EMC2Q15006 297 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 PPP2R5AQ15172 486 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 KNOP1Q1ED39 458 aaKnown RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 EDRF1Q3B7T1 1238 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 PRAMEF19Q5SWL8 479 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 GJC2Q5T442 439 aaPredicted RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 FAM102BQ5T8I3 360 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TTI2Q6NXR4 508 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TRMT1LQ7Z2T5 733 aaKnown RBP9.5□□□□□ -0.89
TRAF3-209ENST00000560463 TLK2Q86UE8 772 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 ANKRD20A12PQ8NF67 263 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 CD99L2Q8TCZ2 262 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
TRAF3-209ENST00000560463 SCFD1Q8WVM8 642 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms